Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2183 ATGGCATTCCAAGATTTCGATATCATAAACGAACGGAGACGACAGGAGAGGAGAAAAAAGATCCAGAAGAGAATCCTCATCGGTCTAGTATCTACCATTCTTCTTGTATGCATCATAGGCGCTGCGGCCTACGTTGGACTCAATTCCAAGTCCTCCGGTGGAGGTGGGAGTGACCACGGCAAGTCACCGTCCAAGCCGAGTCACCAGCCTACCACCACCTCTGCTTCCGCCTCGGCCTCCACCAATACCAAAGCATTGGAAGCTTCATCGAAGATTGTGAAAGTAATATGCGAAGCTGCAGAATATAAGGACAAATGCGAAAGCTCCCTTGGCGATGCTGTTAAGAATGACCCCAACGCACAACCAAAAGATCTGCTTAAATACTCCATCAAACTAGCTCAGGACGAGGTTGGAAAGGCCTTCAACAAAACCACCTCCATGAAATTTGAATCCGAAATGGACAAAGGAGCGTATGAAGATTGCAAGCAGCTTTTTGACGACGCCAAGGAAGAACTCGGCTTCTCCATCTCCGAAATCACCGCTGATGATCTGAAGAAGCTTTCTACAAAAGCCCCTGATCTCAACAACTGGCTGAGTGCAGCTATCTCTTACCACCAAACCTGCATTGATGGCTTCCCCGAAGGGGAATTGAAGACACAACTTAAGGATGTCTTTAAGGATTCTCAAGAATTTGTTAGCAATTCGCTTTCTATTGTAACTGCAGTGTCGACAGTTCTTTCTGCCGTGCAATCAGTTTTGACTCGCCACTTGCTTTCGGAGAAAAACGTCAGCGCTACTCCTTCTTGGGTCAACAGCGAGGATCGGAGGATTCTGAAGGCGGCGGATGACAAACCCACGCCGAACGTAACTGTGGCAAAAGATGGCAGCGGCAACTTCAAAACTGTCTCCGAAGCCTTGGCAGCCATTCCAGAAAAATATGATGGACGCTACGTAGTTTATGTTAAAGAAGGAATATACGAGGAGACAGTGACTGTTACAAAGAAAATGGAAAACATGACCATGTATGGTGATGGATCACAAAAGAGTATCATCACTGGCAGCAAAAATTTTGTAGATGGAGTTAGGACTTTCCAAACTGCAACCTTTGTGGTGCTTGGAAATGGGTTCTTGGGCAAAGCAATGGGATTTAGAAACACTGCTGGGCCGGAGAAGCATCAAGCGGTGGCAGCCAGAGTTCAAGCAGACCGTGCAATGTTCGTTAACTGTCGCTTCGAGGGCTACCAAGACACGCTATACGCCCAAACCCACCGCCAATTCTACCGGAGCTGTGTCATTTCCGGCACCGTCGATTTCATCTTTGGCGACGCAGCCGCCATCTTCCAGAACTGCATCATGACACTTAGAAAACCAATGGACAATCAACAAAACATCGTAACTGCTCAAGGCAGGTACGACCAAAAGGAGACAACTGGCTTCGTTCTGCAAAAGTGTGAGATCAAAGCGGACGACAAGCTAGCTCCGGATAAGGACAAGATCAGGAGCTATCTTGGGAGGCCATGGAAGGAATACTCGAGAACCATTGTAATGGAATCCGATATTGGCGATGTAATTCACCCTGATGGGTGGCTACCTTGGGAAGGCGACTTTGCACTCAAGACACTATTCTATGGTGAGTTCAACAACACAGGACCTGGTGCCAGCACCAATGCCAGGGTCAACTGGGTTGGCCGCAAAGTCCTTAGCAGGGATGAGGCTAGCAAGTTCACTGTAGGAACTTTCTTGGATGGAGCATGGTTTAGTGGTAGAGGCGTACCAACTCAATATGGCTTGTACAATTGA 1800 0.4778 MAFQDFDIINERRRQERRKKIQKRILIGLVSTILLVCIIGAAAYVGLNSKSSGGGGSDHGKSPSKPSHQPTTTSASASASTNTKALEASSKIVKVICEAAEYKDKCESSLGDAVKNDPNAQPKDLLKYSIKLAQDEVGKAFNKTTSMKFESEMDKGAYEDCKQLFDDAKEELGFSISEITADDLKKLSTKAPDLNNWLSAAISYHQTCIDGFPEGELKTQLKDVFKDSQEFVSNSLSIVTAVSTVLSAVQSVLTRHLLSEKNVSATPSWVNSEDRRILKAADDKPTPNVTVAKDGSGNFKTVSEALAAIPEKYDGRYVVYVKEGIYEETVTVTKKMENMTMYGDGSQKSIITGSKNFVDGVRTFQTATFVVLGNGFLGKAMGFRNTAGPEKHQAVAARVQADRAMFVNCRFEGYQDTLYAQTHRQFYRSCVISGTVDFIFGDAAAIFQNCIMTLRKPMDNQQNIVTAQGRYDQKETTGFVLQKCEIKADDKLAPDKDKIRSYLGRPWKEYSRTIVMESDIGDVIHPDGWLPWEGDFALKTLFYGEFNNTGPGASTNARVNWVGRKVLSRDEASKFTVGTFLDGAWFSGRGVPTQYGLYN* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2183 599 CDD PMEI-like_3 96 244 - -
Ahy3g2183 599 MobiDBLite consensus disorder prediction 52 80 - -
Ahy3g2183 599 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Ahy3g2183 599 PANTHER PECTINESTERASE 15 597 - -
Ahy3g2183 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 91 241 IPR035513 -
Ahy3g2183 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 89 243 IPR035513 -
Ahy3g2183 599 TIGRFAM PME_inhib: pectinesterase inhibitor domain 74 240 IPR006501 GO:0004857
Ahy3g2183 599 SUPERFAMILY Pectin lyase-like 286 587 IPR011050 -
Ahy3g2183 599 Pfam Pectinesterase 288 583 IPR000070 GO:0030599|GO:0042545
Ahy3g2183 599 Gene3D - 282 597 IPR012334 -
Ahy3g2183 599 Pfam Plant invertase/pectin methylesterase inhibitor 92 238 IPR006501 GO:0004857
Ahy3g2183 599 PANTHER PECTINESTERASE 15 597 - -
Ahy3g2183 599 SMART PMEI_2 88 238 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2183 Ahy-Chr3 68666150 68669540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2183 1 599 Carbohydrate Esterase AT2G26450 49.679 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2183 - - gmx:100784679 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2431 13 56150666 56154379 Ahy3g2183 3 68666150 68669540 hybridization
Ahy1g1735 1 93440657 93442896 Ahy3g2183 3 68666150 68669540 PCT
Ahy3g2183 3 68666150 68669540 Ahy1g1735 1 93440657 93442896 PCT