Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2166 ATGGTTCAATATGCCAAAGGCCTTCCACTGGCTTTGAATGTGATTGGTTCTGATCTGTTTGGCAAAACAATTGAAGAATGGGAAAGTGCATTGAAGAAATATGAAAGAATTCCAAGCAGAGAGATCTTAGATGTGCTCAGAGTAAGCTATGATAATTTGGATGATAATGAGAAGGAAATTTTCCTTGACATTGCATGTTTCTTCAAAGGAAACTTTAGACAGGATGTGGAAAAGACACTAGTGGCCTCACGTTTCTTTCCAGAATATGGCATTGGAGTACTTATTGACAAATCTCTAGTAACTATTAGTGATGCCAACACAATTAAGATGCATGATCTTATGCAAGACCTTGGAAGAGACATTGCTAGAAAGGATTCGCCATTCGATCCGGGGAAACGTAGAAGACTATGGCACTGTGACGATGTTCTTGAGGTCCTGACAAAAAACACAGTAAGTGCATAG 462 0.3918 MVQYAKGLPLALNVIGSDLFGKTIEEWESALKKYERIPSREILDVLRVSYDNLDDNEKEIFLDIACFFKGNFRQDVEKTLVASRFFPEYGIGVLIDKSLVTISDANTIKMHDLMQDLGRDIARKDSPFDPGKRRRLWHCDDVLEVLTKNTVSA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2166 153 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 148 IPR044974 GO:0006952
Ahy3g2166 153 Gene3D - 1 54 IPR042197 -
Ahy3g2166 153 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 148 - -
Ahy3g2166 153 SUPERFAMILY "Winged helix" DNA-binding domain 41 146 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2166 Ahy-Chr3 66918178 66918639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2166 1 137 WRKY Transcription Factor Family AT5G45050 46.377 5.76e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2166 - - ahf:114927471 309.301