Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2159 ATGGAAGGTGAGCAGCACCAAAGATCAAAACTGAATAAAACTAAGCAGATTGTGAGGCTAAGGGGAATGCTTCGTAGGTGGCACAGTTTCTCATCCTCATCCTCAACCTCAATCTCATCATCACCAAACATTTCAAGTAGCCCCAATTACAACATGATTGACAATTCTGATTACCAAGAACCCACAACTGATGATGATCCAACCTCAAAGAGTAGAGCACCGTGTAATTGTAACTTGGATGAAGAGGATCACAAATGCGAGAGCCCCGAGCCCCCTCCCGATGTTCCGAAAGGGTACTTGGCAGTTTATGTTGGGAGTGAGCTTCGGAGATTCATCATTCCAACTAGCTACCTTACTCATTCTCTCTTCAAGTTATTGCTTGAGAAGGCTGAAGATGAGTTTGGATTTAACCATAATGGTGCTCTCACTATTCCTTGTGAGACTGAGACCTTCAAGTATCTCCTCAGATGCATAGAGACCAACTACGACACCCATCAAGGTAGCTCCTCTGGAAACATAGGAACTTCGGAAGCATAA 537 0.4413 MEGEQHQRSKLNKTKQIVRLRGMLRRWHSFSSSSSTSISSSPNISSSPNYNMIDNSDYQEPTTDDDPTSKSRAPCNCNLDEEDHKCESPEPPPDVPKGYLAVYVGSELRRFIIPTSYLTHSLFKLLLEKAEDEFGFNHNGALTIPCETETFKYLLRCIETNYDTHQGSSSGNIGTSEA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2159 178 MobiDBLite consensus disorder prediction 28 92 - -
Ahy3g2159 178 Pfam Auxin responsive protein 86 158 IPR003676 GO:0009733
Ahy3g2159 178 MobiDBLite consensus disorder prediction 76 91 - -
Ahy3g2159 178 PANTHER AUXIN-INDUCED PROTEIN 15A 12 169 - -
Ahy3g2159 178 MobiDBLite consensus disorder prediction 28 58 - -
Ahy3g2159 178 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 169 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2159 Ahy-Chr3 65994341 65997476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2159 4 177 Calmodulin-binding Proteins AT3G43120 47.222 1.87e-50 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2404 13 54963411 54967135 Ahy3g2159 3 65994341 65997476 hybridization