Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2118 ATGGTTGATTCGATCGAAGAGTCATCGCATAATCAAATAGGGAATGTTTCAGCTGAGGAAATGGACGAATTGTTAGTTGATAGTGATGGCAATGATGTTGAAAACCTATTACTGAATAGTACAGGAAGTATCGGTCGGGTTAATTTCATAGGTTTGAGCGTTGATGCTGCTAAGAAGTATGTATTTTCAGACCTTGATGTTGCGTATGCTTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGTTGGGCGAAGTGAGATTGATAAGCGCATACTCTGGCAAACATTTGTGTGTTCGAGACAGGGATATCGTATTTTCAGAGGGGTTGATGAAACAAATAGGAAGAGAGCTCCAAAGCCAGAGACTAGGTGTGGGTGTGTAGCACAAATGCGAGTTCACATAGATGTTGGTAGGGACTGGTGGTATACAACATTATTTCAAAATGAACATAATCATGAGTTAGTACCGCCAACTTTGAGCCGGCTGTTGAGATCGCAACGGAGAATGACTGATCAAGAAATTCAAAGAATGAACGACATGAGAGATGCTGGAATTTCTACAACCCAAATCTATATGCAATTTTCCGAGCAATCTGGTGGTTTTGAAAATGTTAGATTTCGAAGAAAAGACATGTACAACCAAATAGAAAAGCAAAGGCAATTGATGGAAAGTGATGTGACCGAAACGTTGAAGTACCTAAAGAAGCGGAAGAAATTAGATCCAAAGTTTTACTGGAGCTACGAGGTGGATAATAATGGTGTGTTTCGGCACCTAATCTGGATGGACGGGAAGAGCCGTGTTGACTTTGAAGTATTTGGTGATGTTATGGCCTTTGATGCAACTTACAAGAAAAACAAGTACAAGTTTCCATTGGTAGTTTTTTCAGGAGTGAACCATCACCTTCAAACAATAGTTTTTGGCAGTGCAATTGTAGCTGATGAAGGAGAAGGAACTTACATATGGCTGTTACAGAGATTCGTGGAAGCAATGAATGGAAAACGACCAAATGCTGTGATAACTGATGGTGCCAAGGCTATGAAGCTTGCAATTGAAAAGGTCTTTCCAGATGCACATCATAGGTTGTGCGGATGGCATTTGTTAAGAAATGCCACATCCAATGTCTCCAACCCCAAGTTTACCCAACAATTCAGGAAATGCATGCTTGGCGATTATGAGATTGATGAGTTTGAGGAGAGGTGGGCGTCAATGGTGAATAGTTTTGGGGTTAAGAACATGGAGTGGGTTGAGACCACTTATGGGATTAAAGATATGTGGGCTACAGCACATATGAGAGGCAAATTCTTTGCCGGGTTGAGAACTACATCGAGGTGTGAGGCACTACATTCGCAAGTTGCTAGGTTTGTAAAATCTGGCTATAGCATTAAGGAATTCCTCCATCACTTCCGCCGGTGGATGGGTTTGTTGCGGAATAATGAGGCTGAGGCTGACTATTACACCTCATACGGGTTTCCGATAATGCAAACACAGGTGCAAGCATTGGAGCGATCAGGAGCAAGTGTTTATACAAGGGAGGTGTTCTACTTGTTTCGATCATTATTGTTGAAAGCGTCAAGTGTGATAATAGTTGATTGGCGAGAGACTTCATATAGTGTGAACTATGATGTACGAAAATATTGTGAGTTAACAAGAAAATGGGTTGTATCTTATTGGCCTGGTAGCAGTGAGTTTAGGTGTTCATGTCAACGAATGGAATCATTTGGCATTCCATGTGTTCATATCATTCGTCTGTTGATATATCTTCAAATTACAGAGTTACCTGAGTCACTGATATTGAAGCGGTGGACCATGAAAGCAAAAGAGGCTCATATAAGGTTGGAGCAGCAGGGATCGTTAGTTGGAGATGGAAGTTATGAGAGTAGGATTGCTGCTATGAATGATGAGCTGGAGGGCTTGCCATTTGCTGCTTGCGGAGATTTAAGTGATTTTAAGGATGTTATGGAGTGGGCCAAAATTTTGTCTAGTAACCAAAATTGGAATGAAAATAAAAACATCAAGACTAGTGGGCTGGTTAATGAAGTGAAGCCCAACAATAACAAAGCCAAAGAAATCAAAAGGGTTGTCTAA 2103 0.4089 MVDSIEESSHNQIGNVSAEEMDELLVDSDGNDVENLLLNSTGSIGRVNFIGLSVDAAKKYVFSDLDVAYAFYNAFGRVNGFSIRKFKVGRSEIDKRILWQTFVCSRQGYRIFRGVDETNRKRAPKPETRCGCVAQMRVHIDVGRDWWYTTLFQNEHNHELVPPTLSRLLRSQRRMTDQEIQRMNDMRDAGISTTQIYMQFSEQSGGFENVRFRRKDMYNQIEKQRQLMESDVTETLKYLKKRKKLDPKFYWSYEVDNNGVFRHLIWMDGKSRVDFEVFGDVMAFDATYKKNKYKFPLVVFSGVNHHLQTIVFGSAIVADEGEGTYIWLLQRFVEAMNGKRPNAVITDGAKAMKLAIEKVFPDAHHRLCGWHLLRNATSNVSNPKFTQQFRKCMLGDYEIDEFEERWASMVNSFGVKNMEWVETTYGIKDMWATAHMRGKFFAGLRTTSRCEALHSQVARFVKSGYSIKEFLHHFRRWMGLLRNNEAEADYYTSYGFPIMQTQVQALERSGASVYTREVFYLFRSLLLKASSVIIVDWRETSYSVNYDVRKYCELTRKWVVSYWPGSSEFRCSCQRMESFGIPCVHIIRLLIYLQITELPESLILKRWTMKAKEAHIRLEQQGSLVGDGSYESRIAAMNDELEGLPFAACGDLSDFKDVMEWAKILSSNQNWNENKNIKTSGLVNEVKPNNNKAKEIKRVV* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2118 700 Pfam MULE transposase domain 281 375 IPR018289 -
Ahy3g2118 700 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 617 IPR031052 GO:0006355
Ahy3g2118 700 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Ahy3g2118 700 ProSiteProfiles Zinc finger SWIM-type profile. 542 594 IPR007527 GO:0008270
Ahy3g2118 700 PANTHER OS02G0262500 PROTEIN 61 617 - -
Ahy3g2118 700 Pfam SWIM zinc finger 570 593 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2118 Ahy-Chr3 57762766 57765447 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g2118 MULE 2.40E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2118 - - adu:107465206 1318.14