Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2100 ATGGCTGATCGAAAGAGGGAGCACAAGGTAGTGACTCGTTGTGGCTGCTTAGCTGAGATGAGAATTAAGCGAAAAGATGGCAGTGGCAAGTGGTACGTGTCTCGGTTTTTGGACAACCATAACCATGAGCTCGTAGCTGGGAAGTATGTCGACTATTTGAGGTCGCATAGGGGGCTATCTGATGTTGAAATTGCTCATCTGACTAGCTTGAGGGAGGTTGGTATAAGCATACCAAAAATATATCAGTCATTTGCTGCACAGGTTGGCGGTTTTAACCTCGTCAGGTTCACTAAGCAAGACATGTATACCGAGGTTAGAAAGCAAAGAAGCTTGCAGAATGGGGATGTTAATGCAGCAGTTCGCTATTTGGAAGGTGTAGCTCGTGTGGATAACAGGATGTACTGGAGGTATAAGCTAGGGAAGGACAACAATATGTGCGACCTGTTCTGGAGCGATGGCCGTAGTCAAGTGGATTATGGAATTTTCGGCGATGTCCTTGCATTTGATGCCATATATGGTCGAAACAAGTACAATCTCCCTGTGGTTGTGTTTTCAGGAGTGAACCACCACAATCAAACCTGTGTTTTTGGGGCGGCAATGGTATCGTGCGAAACACAAGAGTCCTACATTTGGGTATTAGAAAAGTTTCTAGAATGCATGGAAGGAAAACCCCCAAATGCGGTCATCACAAATAGAGATCCAGCGATGCACATAGCTATTCACGAGGTCTTTCCCAAGGCCCACCACAGGTTATGTGCATGGCATCTTCTGCGGAACGCCACGTCAAACATATATGACCCACGCTTCACCCATCTTTTTAGGCAATGCATGCTTGCTAACTTGGAGGTTGATGAGTTTGAGGCACATTGGGATGCTATGTTGGACGAATGTGGGGTAAGGGAAGTCGAATGGGTTCAGGACCTGTACCGGCGAAAGCATGCTTGGGCTACTACGTACATCAGAGGCCGCTTTTTTGCTGGTATATGCACAACGTCTCGCTGTGAGTCACTTCACGCGAAGCTTGGTAGGTTTGTGGAGAGTAGGTATGGCATACTTGAATTTGTGACAAACTTCCAAAAGTGTGTCCATTTTTTGCGTGATAATGAGGATGAGCTTGATTTTCGTTCCTCGTATGGGACTCCAGTGTTACAAACTGAATTTGTCGAGCTTGAGAAGTCGGGTTGGACAAAGTACACCCGTGAAATGTTCTTCAGATATCGGGAAACTCTTAGGAGATGTGTTCGAGTTAAGATTTTCCACTGCGGGATGTTAGTGACAGCGGGGAAGTCTATTTTGGTTCGGATGGACATCACATCCCTTCCCGACATGCTGGTTCTCCGTAGATGGTCGAAGACGGCAAAGTTGCATTATGGAATTGTGGGAACTCTGGCTGACCCGAAGAACCACACATCTACATACAGAACACGATTAGGCGCATTTGCTCAGTTATGCACAAGACTTGGTCGAGTTGCATGTCTCAGCGATGACGACTTCAATGATTACTCGAACAAGATACTCAATGATGCCCTCCGACTGGAGATGAAGCACGGGCTAAGGACAGCGGAGGAAACTGTTGTTTCCGTCTCCGATGTTGGCATGAAGGACCCCATTCGTGTGAGAACTAAGGGCACCGGTCGTTTAAGCCAGCCGTCGACAACGATGGAAAAGAAACGGCATAAATGCAGTCGAGCAGAGCCATCCAGATGGCGAAGATGCCACCCGCCTAACTCAGTTTTGATGGAATCGCTAGAGTTTATATTATTCTAA 1767 0.4686 MADRKREHKVVTRCGCLAEMRIKRKDGSGKWYVSRFLDNHNHELVAGKYVDYLRSHRGLSDVEIAHLTSLREVGISIPKIYQSFAAQVGGFNLVRFTKQDMYTEVRKQRSLQNGDVNAAVRYLEGVARVDNRMYWRYKLGKDNNMCDLFWSDGRSQVDYGIFGDVLAFDAIYGRNKYNLPVVVFSGVNHHNQTCVFGAAMVSCETQESYIWVLEKFLECMEGKPPNAVITNRDPAMHIAIHEVFPKAHHRLCAWHLLRNATSNIYDPRFTHLFRQCMLANLEVDEFEAHWDAMLDECGVREVEWVQDLYRRKHAWATTYIRGRFFAGICTTSRCESLHAKLGRFVESRYGILEFVTNFQKCVHFLRDNEDELDFRSSYGTPVLQTEFVELEKSGWTKYTREMFFRYRETLRRCVRVKIFHCGMLVTAGKSILVRMDITSLPDMLVLRRWSKTAKLHYGIVGTLADPKNHTSTYRTRLGAFAQLCTRLGRVACLSDDDFNDYSNKILNDALRLEMKHGLRTAEETVVSVSDVGMKDPIRVRTKGTGRLSQPSTTMEKKRHKCSRAEPSRWRRCHPPNSVLMESLEFILF* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2100 588 Pfam FAR1 DNA-binding domain 4 45 IPR004330 -
Ahy3g2100 588 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 427 IPR031052 GO:0006355
Ahy3g2100 588 Pfam MULE transposase domain 165 259 IPR018289 -
Ahy3g2100 588 PANTHER OS02G0262500 PROTEIN 5 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2100 Ahy-Chr3 52146257 52148627 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g2100 MULE 3.60E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2100 - - aip:107611673 843.958