Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2092 ATGAAGGCTCCTTCCAATGGTTTCTTGCCTAATTCTGGCGAAGGAGAAAAGAAAACAATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTGGTTTCTTTACCTCCTATTGGAAGTCTTGTGGTTTATTTCCCTCAAGGACACAGCGAACAAGTTGCAGCATCCATGCAAAAGGAGGCCGACTTCGTACCAAGTTACCCGAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGTCCTTCATGCTGATCCTGAAACTGACGAGGTTTATGCTCAAATGACCCTTCAACCTGTAAATAAATATGATAAGGAAGCAATACTGGCATCCGACATGGGTCTCAAGCAAAACCAGCAGCCTACTGAATTCTTTTGCAAAACTCTCACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCAGCGGAAAAAATATTCCCACCTCTGGACTTTTCGATGCAACCTCCGGCTCAGGAGATTGTTGCGAAGGATTTGCACGATAGTACATGGACATTTAGGCATATTTATCGCGGACAACCAAAGAGGCACTTGTTGACTACCGGATGGAGTGTCTTTGTTAGCACGAAAAGGCTATTTGCTGGAGATTCTGTTCTTTTCATTAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAAGCGCGCTAATAGGCAGCAGCCGGCACTCTCTTCATCGGTAATATCCAGTGACAGCATGCACATTGGCATTCTTGCTGCTGCAGCCCATGCTGCTTCAAATAACAGCCCTTTTACCATATTTTATAACCCAAGGGCAAGCCCCTCGGAATTTGTGATTCCGTTGGCCAAGTACAACAAGGCCATGTACACTCAAGTTTCTCTTGGTATGAGATTTAGAATGATGTTTGAGACTGAGGAGTCTGGAGTACGCAGATATATGGGTACAATCACCGGCGTTAGTGACTTGGATCCGGTCCGATGGAAAAACTCACAGTGGCGCAATCTTCAGGTTGGTTGGGATGAATCAACAGCTGGGGAGCGCCCAAGCAGAGTTTCGATCTGGGATGTTGAACCAGTAGTTACTCCTTTCTACATTTGTCCTCCTCCATTTTTTAGGCCGAAATTCCCAAAGCAACCAGGAATGCCAGAAGACGAGTCTGACATAGAAAATGCTTTTAAGAGAGCTATGCCCTGGCTTGGAGATGAACTTGGCATGAAGGATGCTTCAAGCTCAATCTTTCCTGGTTTGAGTTTAGTGCAATGGATGAGCATGCAGCAGCAGAACAATCAGTTTGCCGCCACCCAATCCGGATTTTTCCCGCCATCTATGCTTTCATCCAATACCCTCCATGGCAACCTTAACAGTAATGATCAATCCAAGATATTGAACTTCCAAGCCCCGGTCCTCTCTGCACCAAATCTTCAATTCAACAAATCTAATCTACCCAACCAAGTCAACCAACTGCAGCAATCTATGACATCATGGCCCCAACAGCTGCAGCAGCCACAGCAGCAGCAGCAGCAGCAGAAGCTGCATTCATTGTTGCAATCGCCAGTAAACCAGCTTCAGCCACAACAGCAGCAGCAACAGAGGCAACAGCAGCTGCCAGAGCCACAAAACTTGTCGCAGTCACAGCAACAACAGCCCCAACTGCCTCAACAGAGAACACAGCAGCTGCAACAACCACAGCAGCAGCCGCCTCCACCACAGCAACACCAACCTCAACAGTCATGTCAACAGCCAATTATGAATAATCGGGTAGTTACTTCTAATCAATGTGTTCAAGTTCAACAACCGGTAGCCTATTCTCAGCTTCAGCAACAGCAGTTAGTCTCCGGAAGCATGCCGACGCAACAAAGTATCCAACCTGCCAACAAGAATGCAATGCTAATGACATCCTTGCCATTAGACTCGCAATTTCAGCAACCGATAGATCAGCAAACTAGTCTCTTACAGAGGCAGCAGCAACAACCGACACAGTTGCAACAATCTCCATTGCAGTTTTTGCAACAAAGCACGTCGCAGAGGGCATTGCAGCAACTTCAAGGGACTCAAATGTCACAGCAAAACCCCTCAGAGCAACAGTTACAGTTACAGCTGCTGCAGAAACTGCAACAGCAGCAGCAGCAGCAGCAACAGCAACTTATTTCAACATCTAGTCCACTTTTGCAGTCACAGCTTCTGCAGCAAAAAAATACTCATCTGGCAAACCAGCAACTACCACAGCTGCCTCAATCGCAGCATCAACCTCAACAGCTCGGAAATAATTCATTCCCAATGGAGAAGCTTCTCAACAGCAACAGCTTCTCTTCTTCGTCTCTAATGCAATCGCAACAGCTTTCGGTGAACCAACCAACCCTGAATGCACAGAAATCAGTTATAACTAGTAGAGCTCCTTCTAGTCTTACCGATGTAGACGTGCCATCATGCTCGACTTCACCGTCTACTAATACCTGCCAGATATCTCCACCAAATCTCATGAAAAGAAATCAACAAGCACCAACCACATTCGGGGGGATTTCGGTAGTTGAGCCGACTAATAATTTGGTGCAAGAGCTTCATAATAAGTCTGATATGCCGATAAAACATGAATTATCCGGCATAAAAGGCCCTGACCAGCTTAAGTATAAAGGTACAATCAGTGATCAGCTGGAAGCTTCTTCGTCCGGAACATCTTACTGTATTGATCCGGGTAGCATCCACCAGAACTTCCAACTTCCAAACTTCTGCATGGATGGTGATGTTCAATCGCATCCTAGACAAAATCTACCATTTGCCTCCAATCTTGATGGACTAGCAGCGGATACCATGCTCTCAAGAGGTTATGACTCTCAAAAAGATCTTCAAAACTTGCTGGCTAACTATGGCGGTGCTCCAAGAGACATCGAAACAGAGCTGTCCACTGCCGCCATCAGCTCGCAGTCATTTGGGGTGCCGAACATGCCTTTCAAGCCTGGTTGCTCAAGTGATATTCCCATGAACGATGCTGGGGTTTTGAATAATGGCTTATGGGCTAACCAGACTCAGAGAATGCGAACATATACCAAGGTTCAAAAATGTGGTTCTGTTGGAAGATGTATCGACGTCACGCGATACAAAGGATATGATGAACTCCGCCACGATTTGGCTCGAATGTTCGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACCGAGTGGAAACTAGTATATGTGGATCATGAGAATGACATTCTTCTTGTTGGTGATGACCCGTGGGAAGAATTCGTAAGCTGTGTTCAGAGCATAAAGATATTGTCGTCCGCCGAGGTGCAACAAATGAGTTTGGATGGGGATCTAGGCCAAGTTCCAATCCCTAATCAAGCATGTAGTGGCACGGAAGGTGGCAATGCATGGAGGGGACAGTACGACGATAACTCTGCCGCCTCATTTAATCGATAA 3414 0.4613 MKAPSNGFLPNSGEGEKKTINSELWHACAGPLVSLPPIGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVVLHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGVSDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDVEPVVTPFYICPPPFFRPKFPKQPGMPEDESDIENAFKRAMPWLGDELGMKDASSSIFPGLSLVQWMSMQQQNNQFAATQSGFFPPSMLSSNTLHGNLNSNDQSKILNFQAPVLSAPNLQFNKSNLPNQVNQLQQSMTSWPQQLQQPQQQQQQQKLHSLLQSPVNQLQPQQQQQQRQQQLPEPQNLSQSQQQQPQLPQQRTQQLQQPQQQPPPPQQHQPQQSCQQPIMNNRVVTSNQCVQVQQPVAYSQLQQQQLVSGSMPTQQSIQPANKNAMLMTSLPLDSQFQQPIDQQTSLLQRQQQQPTQLQQSPLQFLQQSTSQRALQQLQGTQMSQQNPSEQQLQLQLLQKLQQQQQQQQQQLISTSSPLLQSQLLQQKNTHLANQQLPQLPQSQHQPQQLGNNSFPMEKLLNSNSFSSSSLMQSQQLSVNQPTLNAQKSVITSRAPSSLTDVDVPSCSTSPSTNTCQISPPNLMKRNQQAPTTFGGISVVEPTNNLVQELHNKSDMPIKHELSGIKGPDQLKYKGTISDQLEASSSGTSYCIDPGSIHQNFQLPNFCMDGDVQSHPRQNLPFASNLDGLAADTMLSRGYDSQKDLQNLLANYGGAPRDIETELSTAAISSQSFGVPNMPFKPGCSSDIPMNDAGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGQVPIPNQACSGTEGGNAWRGQYDDNSAASFNR* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2092 1137 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy3g2092 1137 SMART B3_2 126 228 IPR003340 GO:0003677
Ahy3g2092 1137 Pfam AUX/IAA family 1007 1096 IPR033389 -
Ahy3g2092 1137 Gene3D - 123 227 IPR015300 -
Ahy3g2092 1137 CDD B3_DNA 125 217 IPR003340 GO:0003677
Ahy3g2092 1137 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Ahy3g2092 1137 ProSiteProfiles PB1 domain profile. 1010 1103 IPR000270 GO:0005515
Ahy3g2092 1137 MobiDBLite consensus disorder prediction 1115 1137 - -
Ahy3g2092 1137 Gene3D - 289 360 - -
Ahy3g2092 1137 MobiDBLite consensus disorder prediction 797 824 - -
Ahy3g2092 1137 SUPERFAMILY CAD & PB1 domains 1024 1088 - -
Ahy3g2092 1137 MobiDBLite consensus disorder prediction 645 666 - -
Ahy3g2092 1137 Gene3D - 1005 1099 - -
Ahy3g2092 1137 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1124 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy3g2092 1137 MobiDBLite consensus disorder prediction 488 559 - -
Ahy3g2092 1137 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Ahy3g2092 1137 PANTHER AUXIN RESPONSE FACTOR 19 1 1124 - -
Ahy3g2092 1137 MobiDBLite consensus disorder prediction 488 576 - -
Ahy3g2092 1137 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2092 Ahy-Chr3 51230216 51238420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2092 1 498 B3 DNA Binding Superfamily AT1G19220 81.526 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy3g2092 AUX_IAA 2.50E-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2092 K14486 - gmx:100804628 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2385 13 53071882 53080074 Ahy3g2092 3 51230216 51238420 hybridization