Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2076 ATGGCCGCTGTTCGCTCTAACAACCACAACCGCCGCAGTCACGTTTTCTACGTGTTCTTGTTCATTGCTGTCTCTCTCTACAGCCTCCCACTGTCTCTCTCAGGCGACGCGGAGTCCCTTCAAAAGCTTAAACAATCCTTCACCAACGGTGATCGAGTGCTGTACACGTGGGAACCCAACACGTCACCTTGCGAAAACTGGATGGGCCTGATGTGCGTCGACGGCATGGTAATGGGCATTCGCCTCTCTGACATGGGCTTGTCTGGTACCATCAACATAGACGCTCTTGCCGAGATCCCCGGGCTCAGGACCCTAAGCTTCACCAACAACAGCTTCACGGGTCCAATCCCTGACTTCAGCAGGCTCGGCGCCATCAAAGTCCTCTTGCTCTCCTACAACCAATTCTCCGGGCCCATCCCTTCCGATTTCTTCTCCAAATTGACTTCCCTAAAGAAAGTTTGGATCGACTCGAATAACTTCTCTGGCCAGATACCCGAATCTTTGATGGAGCTAGCGCTTCTCAAAGAGCTTCACATCGAGAACAACCACTTCACCGGAAGGATACCCGCTGTGAAGGAAGATTTGACCTCGTTCAACGCATCCTACAACAACCTCGAAGGTCCTATACCGGAAGCGCTGGCTAGGTTCGGTGAGAATGCGTTTGCTGGTACCGGGAACGAGAAGCTTTGCGGGAAGCCGTTGAGGAGAAGCTGCGATAGTAGTGGCTTGCCTTCCTCGTCATCCTACACGTTACCACCGCTTGATAAGAATCAAGGGTCAGGGCCAGGGTGGGGCATGAAGATTATCCTGTTTCTGTTCTTGGCTGCAGTGGCAGCGCTTGTGTTCGTGTTCGTAAAGGCGCGGCGGAGGAACGATGAGTTCGGGTTGATGGGGAGAATAAACAGTGTGGATTCGATGGTGGACATTCACGTGACGAGTACGAACGGCTACAGGGCGCCGGAGGGAGAGGGGTCGGTGGGGATGGCGAAGAGAGGGGATTCGAACAAAGGAGGGGCGCGGGGGAAGGGAGGGGGAATGGGGGACCTTGTAATGGTGAACGACGAGAGAGGGGTGTTTGGGCTGCAGGATTTGATGAAGGCGTCGGCGGAGGTGCTGGGGAACGGGGGGCTGGGATCGGCGTACAAGGCGGCGATGACGAACGGGCTGTCGGTGGTGGTGAAGAGGATGAGGGATATGAACAAAATGGGAAGGGATGTGTTTGACGCTGAGATGAGGCAGTTTGGGAGGATGAGGCATAAGAATATATTGGGGCCTTTGGCTTACCATTACCGTCGGGAGGAGAAGCTCTTCGTTACTGAGTATATGCCCAAAGGCAGCTTGCTTTATGTCTTGCATGGTGACAGAGGAACAGCCCATGCAGAGTTGAACTGGCCGACCAGGTTAAAGATTGTGAAGGGAATAGCAAGAGGGTTGTCATACCTCTACACTCAATTTTCCACCTATGACCTTCCCCATGGAAACCTCAAGTCCAGCAATGTCCTCCTCAGTGATGACTATGAGCCTCTCTTAGGTGACTTCGGATTCCACCCACTCATCAACCCCACGGCCGCCGTTCAAGCCATGTTCGCCTACAAATCCCCTGACTATATTCAGTACCAAAAGGTCTCCCAGAAGACCGACGTCTACTGCCTCGGTGTCCTCATCCTCGAGATCATTACCGGCAAGTTCCCTTCCCAGTATCATAGCAATGGAAAGGGTGGCACTGATGTTGTTCAACGGGTATTCACGGCGATTTCCGAGTCCAGGGAAGAAGAACTCATCGATCCAGAGTTGCAAGGGAACATGGGATCGCAAACTCAGATGTTGCAGCTTATCCACATTGGTGCTGATTGCACTGAGAGCAATCCTGACAAAAGACTTGCCATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTGTAA 1926 0.528 MAAVRSNNHNRRSHVFYVFLFIAVSLYSLPLSLSGDAESLQKLKQSFTNGDRVLYTWEPNTSPCENWMGLMCVDGMVMGIRLSDMGLSGTINIDALAEIPGLRTLSFTNNSFTGPIPDFSRLGAIKVLLLSYNQFSGPIPSDFFSKLTSLKKVWIDSNNFSGQIPESLMELALLKELHIENNHFTGRIPAVKEDLTSFNASYNNLEGPIPEALARFGENAFAGTGNEKLCGKPLRRSCDSSGLPSSSSYTLPPLDKNQGSGPGWGMKIILFLFLAAVAALVFVFVKARRRNDEFGLMGRINSVDSMVDIHVTSTNGYRAPEGEGSVGMAKRGDSNKGGARGKGGGMGDLVMVNDERGVFGLQDLMKASAEVLGNGGLGSAYKAAMTNGLSVVVKRMRDMNKMGRDVFDAEMRQFGRMRHKNILGPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTAHAELNWPTRLKIVKGIARGLSYLYTQFSTYDLPHGNLKSSNVLLSDDYEPLLGDFGFHPLINPTAAVQAMFAYKSPDYIQYQKVSQKTDVYCLGVLILEIITGKFPSQYHSNGKGGTDVVQRVFTAISESREEELIDPELQGNMGSQTQMLQLIHIGADCTESNPDKRLAMKEAIRRIEEVQV* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2076 641 Gene3D Transferase(Phosphotransferase) domain 1 443 641 - -
Ahy3g2076 641 PANTHER LRR RECEPTOR-LIKE KINASE 13 641 - -
Ahy3g2076 641 Gene3D Ribonuclease Inhibitor 145 240 IPR032675 -
Ahy3g2076 641 MobiDBLite consensus disorder prediction 320 342 - -
Ahy3g2076 641 Gene3D Ribonuclease Inhibitor 35 144 IPR032675 -
Ahy3g2076 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 641 - -
Ahy3g2076 641 ProSiteProfiles Protein kinase domain profile. 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2076 641 SUPERFAMILY Protein kinase-like (PK-like) 370 636 IPR011009 -
Ahy3g2076 641 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Ahy3g2076 641 Pfam Protein kinase domain 370 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2076 641 SUPERFAMILY L domain-like 35 215 - -
Ahy3g2076 641 Gene3D Phosphorylase Kinase; domain 1 372 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2076 Ahy-Chr3 50049331 50052062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2076 15 641 Receptor kinase-like Gene Family AT3G42880 48.518 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy3g2076 Pkinase 6.10E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2076 - - ahf:112738359 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2368 13 51967173 51969593 Ahy3g2076 3 50049331 50052062 hybridization
Ahy1g1762 1 93899066 93900916 Ahy3g2076 3 50049331 50052062 PCT
Ahy3g2076 3 50049331 50052062 Ahy1g1762 1 93899066 93900916 PCT