Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2054 ATGACTCTCGAAGACTTCTTTACTTTGACTGAGATGAGAGATGGGCTCACTGCCCCTTCTCGAGTCCAGGAGTTGGTCTCTGAAATGCAAAAGGAGCAAGATAGTGTTGTTAAGAATGCTTGTGATGCAACGAGGCAGTGGGCTGCTGTTGCAAGCACCATTGCTGCTACTGAAAATAAAGATTGTCTTGATCTATTTATTCAATTAGATGGTCTTTTGTTCATCAATAGATGGTTAAATGAGTCACACAATTTTGGCGCTGATGCAAATGATGGCTTCATTGAAGAGTCAATTTCAGCATTATTACGGGCAATTGAAAAGCTGCAACTTGACAGCAAGAAGTCAATCTCATCAGGAATTTGGGGAACTGTACATAAGCTTCTTGGCCACCATAGCTCTAGAGTTCGAGATCGGGCAAGACAATTATTTGACAGCTGGGAAGGAGGTGAAAATGGTGAGGTTGAACCTCAAGTTGACAGATCGAGTGATAAAATTGCCAAGGAGGAATGCCAGCCATCTGCTGTGACAGAAGGTGGCAATGATGATGGTCATGCATCAGAAACTGTAGTAGGTGAGAAGTCTCAATTGAGAAGGTCAGATAGCATGCTACCAGAAAAAGTTGCTACCGAACAGATACCAAGTTCTGACAATGCACCTGAGTCTTCTGTAAGTTTGGATTCTGAACATCTCAAAGAAAAAGCAAACCATTTTTCTAGTGTTTTGACTCCCGTCCAAGAAGTTGCTCCCATAAGTGAAGGTGTGGCCACAGTAACTGAGATCTGTAACTCTCATATTCCAAAACCAGGAAATTTTAAAGGAGAGCCAGATGATGTACAGTTGAATGACTTATCCAAAGCGGAGAAGCTAGAGCAAAATAATAGTGTCCCTCCCGAAAATTCAGGAATAGCAGATAGCTCTTTTTCATCCTCAAAGCTAGGGCATGGACCTGTTTCTTTGGGTGCGACTGAAACAAATGCACCCGAATCTGTGAAAGAACCTACTTTAGAACATAATGATGAGAACAATGAGAATGGTGTTTGTCATATAATGGCTGTTCCTTGCGACATGAGAACACCTGCATCTGATGCAAAGAGTGCGGTGGATGACGTAGAAGCTATAAATTCTAGCAATCCCCAGCCCCCAAAAGCTTCAGAAAATGATAATGAATGCGTTTCTAATATGTTGCAGGACTCATCAGTCAGGGACAGAAACCTGGGAAAGTCAGAGCAGCTAGAGATGCCTTTTCTTTCAACAGAATATGTTAAAGGAGTAACAGAGGGCAAGGGCCAAGTATCCAATCAAGGAAATGGGGCCTCAAGTTATGGCAGTGAACGTGAGTATGATAATGTTGATAACAATGCCTTAAAAGGTGCTCGACAAGTTTCTTTGGAAAAGGGCCAAGTTTCTAACAAAGTCATTGATGCCTCGAATGGTTCTGATTCTTCTAGAAGGAGGAAGCGGCCCAGAATCCCAAACCTTATCAAGAAAACTTCCGATATTGAACTCGAGTATGGGATTGTTGATGCTTTAGAAGTTGCTCGACAAGTTGCTCAGGAAGTTGAGAGAGAAGTCCGCAGCTCATCTTCAGAGGAAATTTCAGAAGGCAGAATAAGGCGACCAGGGAGTTCAGGCAGTCCAGTTTCTTCAGATAATAAATATGAACTAACCCATGTCCTGCCTGAGGAGGTATCGTCCAGGCAAAGCAACTCTGCTGATGCATGTTCTGAACAGGATGGACATATGAGTTACTCAGACAATATTGAGGCCCAGGCACAGCCAGAATGCTTACCTGACTTGGAGTCCTCACAGGTGACTGAAGCAGCTCAAGATCCAGGAGGTAATTCAGAGAAAAGCCTGTGTACCTTCGATCTGAATGAAGAAATTGGTTCAAATGGTATGGACGTGTCAGTAAATACTATGCCTGCCGCACCAATACCAGTTGTCTCTGTTTCAAAGCCTGCACAGAGTTCTGGGCCGCCAACTGCTCCTTTGCAGTTTGAAGGGACACTTGGATGGAAAGGATCAGCTGTCACTAGTGCCTTTCGTCCTGCATCACCTCGTAGAAGTTCTGATAGTGAGAGGAATGTTTCTGTTGGTGGGAACTCACATAGTTCCAAGCGAAGGCATGATTTCCTCGATATTGATTTGAATGTGGCTGATGGGGATGAAGAACTGGTAAAACAAAAATCCTCAGGCCTTCCTTTTGAGCAGTCATTAGCGGAACTTAATCCTAAACAGTCCAGCAGGCTTGACTTGGATTTAAACAGTGTTGGTGACGATGGTGACATCCAACCTTCAAATCGCAGAACAGAAGCGCAACTGTTTTCCCAAAGAAATGACTTTTGGAGTCCGTTACATGGAGCATCGTCGTCATCAATGCAGCCTTCAGTTCGCAACATTGATCTGAATGACAGACCATATTTTCAAACTGCTTTGGTGGAACAAGGGCCTAGTAAGTCTTTGTTTATGGATTCATATGGGCGTTCAAAGTCAGATGCTCCTGTGATCTCTATTTTGGGTGCCAAGGTGGAAGTTGATAGGAGAGAACATGTTCCTCAAACGATATCTATTCCAAATGGCAAAGGTATTGAGCCTGTCATCGATCTTACAATGTCAGGAGCAGGTGCCATGTTGGGGATGTGCCCTTCAGTATCTTACAGTAAGTCAGCTGTTTTCGGGTATAATGGCCTGACATCAGGCCCCCATCTATCATTTTCGTCAGCCATGTATGCATCTGGTGGCACAATTCCATACATGGTGGACTCAAGAGGTGCTCCTGTGGTTCCTCAAGTTGGGGGGTCTTCATCAACCATTCTGCCATCTTACTCTCAGCCTCCAGTTGTCGTGAACATGGCCGGTACACAACTCAGTTTAAATGGGGTCGGGTCTTCGCCTCCAAACTTTGATTTAAATTCCAACTTCATGACTGATGGTGGACCTAGAGATACATTGGCTGCAAGGCAGTTTTTCTTTCCCTCTTCTGGAAGAGCTTTGGAGGAGCATGCTAGGACCATTCCGCAATCCTCAAGTTCTGGGGGTGATGGAAAAAGAAAGGAACCAGACAGTGGCTGGGATCCTTATCCATTTAGCTACAGAGGTCCTCAACCTCCATGGAAGTAG 3120 0.4433 MTLEDFFTLTEMRDGLTAPSRVQELVSEMQKEQDSVVKNACDATRQWAAVASTIAATENKDCLDLFIQLDGLLFINRWLNESHNFGADANDGFIEESISALLRAIEKLQLDSKKSISSGIWGTVHKLLGHHSSRVRDRARQLFDSWEGGENGEVEPQVDRSSDKIAKEECQPSAVTEGGNDDGHASETVVGEKSQLRRSDSMLPEKVATEQIPSSDNAPESSVSLDSEHLKEKANHFSSVLTPVQEVAPISEGVATVTEICNSHIPKPGNFKGEPDDVQLNDLSKAEKLEQNNSVPPENSGIADSSFSSSKLGHGPVSLGATETNAPESVKEPTLEHNDENNENGVCHIMAVPCDMRTPASDAKSAVDDVEAINSSNPQPPKASENDNECVSNMLQDSSVRDRNLGKSEQLEMPFLSTEYVKGVTEGKGQVSNQGNGASSYGSEREYDNVDNNALKGARQVSLEKGQVSNKVIDASNGSDSSRRRKRPRIPNLIKKTSDIELEYGIVDALEVARQVAQEVEREVRSSSSEEISEGRIRRPGSSGSPVSSDNKYELTHVLPEEVSSRQSNSADACSEQDGHMSYSDNIEAQAQPECLPDLESSQVTEAAQDPGGNSEKSLCTFDLNEEIGSNGMDVSVNTMPAAPIPVVSVSKPAQSSGPPTAPLQFEGTLGWKGSAVTSAFRPASPRRSSDSERNVSVGGNSHSSKRRHDFLDIDLNVADGDEELVKQKSSGLPFEQSLAELNPKQSSRLDLDLNSVGDDGDIQPSNRRTEAQLFSQRNDFWSPLHGASSSSMQPSVRNIDLNDRPYFQTALVEQGPSKSLFMDSYGRSKSDAPVISILGAKVEVDRREHVPQTISIPNGKGIEPVIDLTMSGAGAMLGMCPSVSYSKSAVFGYNGLTSGPHLSFSSAMYASGGTIPYMVDSRGAPVVPQVGGSSSTILPSYSQPPVVVNMAGTQLSLNGVGSSPPNFDLNSNFMTDGGPRDTLAARQFFFPSSGRALEEHARTIPQSSSSGGDGKRKEPDSGWDPYPFSYRGPQPPWK* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 520 537 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 463 477 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 679 707 - -
Ahy3g2054 1039 Pfam TFIIS helical bundle-like domain 101 146 IPR017923 -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 146 230 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 561 580 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 370 389 - -
Ahy3g2054 1039 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 1039 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 290 315 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 997 1039 - -
Ahy3g2054 1039 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 1039 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 460 491 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 359 389 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 742 766 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 426 446 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 682 702 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 153 167 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 427 446 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 186 204 - -
Ahy3g2054 1039 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 16 148 IPR035441 -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 290 342 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 520 551 - -
Ahy3g2054 1039 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 154 IPR035441 -
Ahy3g2054 1039 Coils Coil 510 530 - -
Ahy3g2054 1039 MobiDBLite consensus disorder prediction 208 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2054 Ahy-Chr3 47931644 47937673 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Ahy3g2054 Med26 9.10E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2054 - - adu:107479123 1994.93