Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2039 ATGATGAACAGTAGCAGCAGCAGCAGCAGTAGTAGTAGAAACAGTACCACTGTCCCTCCTGATCTTCTCTTCACTCTCAAAAGAAGCCATTTCAATTTGCCTCATCACCAACCAGCAGCTCAACAACAACACTTTGGATGGAACTATCTTGAAATGGGTTTGGGAAGAAAAATAGACCCGGAACCAGGAAGGTGCAGAAGAACAGATGGAAAAAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACCGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAACTTTTGAAAACAACAACAAACGCATGCAATAGTGCTTCTTCAGCAACAACCCACACCATCATCTCATCACCATCATCAATCACTAAAACTAATCAGCACCCTCAACAACGTTCTTGCTATAATAATGGTTCCAATCTTCTTCATCAGCATTCCTTTGTCTTCAATTCCCACACTCCATCAAGGTCATCAACATCTGCTGTTGCTTTTTCATTTCAAGACAACACTGCTCCCTCCAGTAGGTATGTCTATGGAGTGAAAGAGGATGCGGATGAACGTGCTTTCTTCAAAGAACCTTCTAGCACATTGAAAAGCTTCTCTGGATCCTCCATTGACGATTCATGGCAACTCACACCATTGACCATAAGCACCTCATCTTCTTCTTCCTCCACAAAACAGAGGAGATGCACAAGTTTATCCAACAATATTGAGAGCCTCAATGAGCGCTCAAAAAATCAAGAACAAGATCAGAAGACTACTGTTCATAGCTTCTTTGATGAATGGCCCCACAAAGGCAGAGGATTTGATTCCGATGACAAATGTTCTTCCACAACCAAATTATCAATTTCCATTCCATCAACATCTTTTCATGACTTTCCCGTCCTTCAGTTCAAGAACCCACCTCACTGCTGA 936 0.4263 MMNSSSSSSSSSRNSTTVPPDLLFTLKRSHFNLPHHQPAAQQQHFGWNYLEMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELLKTTTNACNSASSATTHTIISSPSSITKTNQHPQQRSCYNNGSNLLHQHSFVFNSHTPSRSSTSAVAFSFQDNTAPSSRYVYGVKEDADERAFFKEPSSTLKSFSGSSIDDSWQLTPLTISTSSSSSSTKQRRCTSLSNNIESLNERSKNQEQDQKTTVHSFFDEWPHKGRGFDSDDKCSSTTKLSISIPSTSFHDFPVLQFKNPPHC* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2039 311 Coils Coil 237 257 - -
Ahy3g2039 311 ProSiteProfiles WRC domain profile. 59 103 IPR014977 -
Ahy3g2039 311 MobiDBLite consensus disorder prediction 1 20 - -
Ahy3g2039 311 Pfam WRC 60 102 IPR014977 -
Ahy3g2039 311 PANTHER - 16 295 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy3g2039 311 PANTHER GROWTH-REGULATING FACTOR 6 16 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2039 Ahy-Chr3 46790421 46794088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2039 18 102 GRF Transcription Factor Family AT3G13960 60.440 2.09e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2039 - - gmx:100814271 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2327 13 49987005 49990764 Ahy3g2039 3 46790421 46794088 hybridization
Ahy11g3163 11 149197746 149200399 Ahy3g2039 3 46790421 46794088 PCT
Ahy1g1790 1 94207405 94209468 Ahy3g2039 3 46790421 46794088 PCT
Ahy3g2039 3 46790421 46794088 Ahy11g3163 11 149197746 149200399 PCT
Ahy3g2039 3 46790421 46794088 Ahy1g1790 1 94207405 94209468 PCT