Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2021 ATGGAGAACGGAGAGGAAAAAGGCGTGGCGGCACATAGAACAGTAGGGACAAAGAACGAGGTTGTTCTTCGAATTCCCGAGAGCGAAAACATCATTTCCTATTCTCCTCAGCAGAAGGGTTCACCCTCAAAAGCCTTCGTAGATTCTTCAAATGTTGAACTAGCAGCTGAACTTCAGAGTCTAAAAAACAGTAGTACTGTTCAATCTCCAACTGCTACCACTTCAACCCGCTCTGTTGGTCGTTCCGAATTCTCGAAGCCAAAATCTAGATTGGTGGAACCGCCACATCCAATAGCTGCAAGCTTTCTTGAAGACAAAACCCAAATCAAGAGCTTCAAATCACCCGCAAGGACTTCCACCAGCAAAAAGACTACTCCTAATGCCACACCTCCAAGGGATGTTCCTATTACCCCAAGAACCCCTTTGATTGGGACTCCAATGGAAGAAGAAGAAGAGGAGGAGGAGGAGTTTTACAAGACCACAAACGTTGAAGTGAGCAAGAAGAGATCTGGCAAGAGGTGGAAGTTCCTGTGTATGATTGAGTGGGTTGGTTTTGTTTCCATAGTTGGGTTCTTGATTGTATCCTTAGCAATCAAAAGGTTGCGAAATTCCGAAATATGGGGCTTGGAGCTGTGGAAATGGTGTGTTCTTGCACTGGTTATCCTCTGTGGGAGACTTGTCACTGGGTGGTTTATAAATGTTATGGTTTTCTTGATTGAAAGGAATTTCTTGTTCAAGAAGAAGGTTCTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAAGCATTTTTATGGTTGGGCATTGTTCTTATGGCATGGGGTTTGATTTTCAATCATGGGATTAAGAGATCAAGAAGAGTTAATAGGGTTCTTGATTACATTACAAGATCTCTTGCATCTTGTCTTATTGGGGCAGCTCTATGGTTGGCAAAAATGTTGCTGATTAAGCTACTAGCTTCGCATTTCCAATCGGCTAGGTTTTTCAACCGGATTCAAGAGTCAATTTTTCATCAATACATTCTTCGGACCCTTTCAGGGCCTCCCTTGATGGAAATTGCGGAAAATGTGGGAAAGAATTCAAGTAGCAGCCGGTTGAGTTTTAAGACTTTGGTTAGGGAGAATGGGAATGAAGAGAAGAAAGAAGAGGTCATTGATGTGGAGAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTTGACTATGAAAGGATTGATCAATGTGATAAAGAGTTCTGGATTGACCACGATTCTGCCGCAGAGTGTTGATGAAGATGAGAATGAGCAGATAGATAGCGAGATTACTAGTGAGTTGGAAGCAAAGGAGGCAGCATATCGAATTTTCAGCAATGTAGCCAAGCCAGGAAGCAAGTACATTCAGAAGGAAGACCTATTGCGCTTCATGACCAATGAAGAAGTTGAAAACCTGCTTCCGTTATTTGAAGGAGCAGTTGCAACTGGAAGAATCAAGAGGAAGTCTCTCAAGAATTGGCTGGTGAAAGTCTACCAAGAGCGTCAATCCCTTGTGCATTCGCTAAATGATACAAAAACAGCTGTCGATGATTTGAACTTGCTTGCTTCCGTGCTCATCATTATTGTGATCATCATTGTTTGGTTGCTTATAATGGGGTTCCTCACAACCCATGTTCTTCTCTTTATTACATCTCAGCTTTTACTCGCGGTGTTTATATTTGGTAACTCAGCTAAGACTGTCTTTGAAGCTATTATATTTGTTTTCGTGAGGCATCCGTTTGATGTTGGCGATCGTTGTGTCATCGATGGTGTTCAGATGACTGTTGAGGAGATGAACATACTAACTACAATCTTCTTGAGATTTGACAATGAAAAGATTTCATATCCAAATTCAGTTCTAGCAAACAAGCCTATCAGTAACTTCTACAGGAGTCCAGAAATGAGCGAATCAATCGAATTTTCTGTCGATATGTCGACACCAATTGAGAGTATCGCAGCTCTGAAGTCAAGAATAAAATCATACTTGGAGAGCAAGCCGCAGCATTGGGGTCCGAACCATAGCGTGGTGGTTAAAGATATTGAGAATGTAGACAAGATGAAAATGGGACTCAATGTTAATCACACCATAAACTTTCAGAATTATGGGGATAAGAGCAGCAGAAGATCTGAATTACTCTTGGAGTTAAAGAAAATTCTTGAGGATATTAAGATTAAGTATCATCTTCTGCCACAAGAAGTTCATCTGAGTTATGTAAATTCCGAAAATTCGACAAAACAAACCGTTTGGAGATGA 2265 0.4106 MENGEEKGVAAHRTVGTKNEVVLRIPESENIISYSPQQKGSPSKAFVDSSNVELAAELQSLKNSSTVQSPTATTSTRSVGRSEFSKPKSRLVEPPHPIAASFLEDKTQIKSFKSPARTSTSKKTTPNATPPRDVPITPRTPLIGTPMEEEEEEEEEFYKTTNVEVSKKRSGKRWKFLCMIEWVGFVSIVGFLIVSLAIKRLRNSEIWGLELWKWCVLALVILCGRLVTGWFINVMVFLIERNFLFKKKVLYFVYGVKKSVQAFLWLGIVLMAWGLIFNHGIKRSRRVNRVLDYITRSLASCLIGAALWLAKMLLIKLLASHFQSARFFNRIQESIFHQYILRTLSGPPLMEIAENVGKNSSSSRLSFKTLVRENGNEEKKEEVIDVEKLKKMKQEKVSALTMKGLINVIKSSGLTTILPQSVDEDENEQIDSEITSELEAKEAAYRIFSNVAKPGSKYIQKEDLLRFMTNEEVENLLPLFEGAVATGRIKRKSLKNWLVKVYQERQSLVHSLNDTKTAVDDLNLLASVLIIIVIIIVWLLIMGFLTTHVLLFITSQLLLAVFIFGNSAKTVFEAIIFVFVRHPFDVGDRCVIDGVQMTVEEMNILTTIFLRFDNEKISYPNSVLANKPISNFYRSPEMSESIEFSVDMSTPIESIAALKSRIKSYLESKPQHWGPNHSVVVKDIENVDKMKMGLNVNHTINFQNYGDKSSRRSELLLELKKILEDIKIKYHLLPQEVHLSYVNSENSTKQTVWR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2021 754 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 18 744 - -
Ahy3g2021 754 Gene3D - 583 632 IPR023408 -
Ahy3g2021 754 SUPERFAMILY Sm-like ribonucleoproteins 573 632 IPR010920 -
Ahy3g2021 754 PIRSF Memb_At2g17000 9 752 IPR016688 -
Ahy3g2021 754 MobiDBLite consensus disorder prediction 60 82 - -
Ahy3g2021 754 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 18 744 IPR016688 -
Ahy3g2021 754 Coils Coil 376 396 - -
Ahy3g2021 754 MobiDBLite consensus disorder prediction 113 141 - -
Ahy3g2021 754 MobiDBLite consensus disorder prediction 113 130 - -
Ahy3g2021 754 Pfam Mechanosensitive ion channel 526 729 IPR006685 GO:0016020|GO:0055085
Ahy3g2021 754 MobiDBLite consensus disorder prediction 60 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2021 Ahy-Chr3 45405491 45409283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2021 68 743 Mechanosensitive Ion Channel Family AT5G12080 51.391 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2021 K22048 - gmx:100777332 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2306 13 48222055 48225893 Ahy3g2021 3 45405491 45409283 hybridization