Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2006 ATGAAGAAAGGGTGCTTAGGACCCAATCTGAAGCTCACTGTTCCTGTTCCTGCAACTCATCACCCTTCTTTTCCAAGCTTCCTGAATGAAAGCGGCACGTTTATTGATGGGAACCTGCTTGTCAATGGCGACGGAGTTCTGATCGCTTCTCAGGGTGAAGTGGGAACTGAAATCCGAATGATGGTTGAGGAGCCTATGCACACGCAGATAGCACGAGAGCTAAAAATCAATCAGTCGGCACAATGTCCATATGTTGTTGTCTACTACCAATCATTCTACAATAATGGGGTCTTATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTGGAAGATTTTCTTAGCATAGTGAAAACAATTCCAGAGCCATATCTTGCCGCGATCTGCAAGCAGGTGCTGAAGGGTTTAATTTATCTTCATCATGAAAAACATATTATCCATAGGGACTTAAAGCCTTCTAATTTGTTGATAAATCATAGAGGAGAAGTAAAGATTACTGATTTTGGTGTGAGCGCAATCATGGACACCACATCTGGTCTAGCTAATACTTTTATTGGCACATACAGCTACATGTCTCCAGAGAGAATTACTGGAAACCCTGGTGGTTACAACTATAGAAGTGATATATGGAGCTTGGGACTGATATTGCTCAAGTGTGCTACAGGAAAGTTTCCATATACACCACCTGATAAAAAAGAAGGATGGGAAAATATCTACCAGCTTATTGAAATCATTGTCGAAAAACCTCCGCCGAGTGCTCCATCTGATCAATTTTCTCTGGAATTTTGTTCTTTCATCTCTGCATGTTTACAGAAAAATCCAAGGGATAGAAAGTCAGCTCCAGACCTTGCGAGACATCCATTTATCAACATGTATGAGGACTTGGATGTGGACCTTTCAGCATACTTCTCCAATGGAGGATCTACACCTGCAACCATATAA 942 0.4161 MKKGCLGPNLKLTVPVPATHHPSFPSFLNESGTFIDGNLLVNGDGVLIASQGEVGTEIRMMVEEPMHTQIARELKINQSAQCPYVVVYYQSFYNNGVLSIILEYMDGGSLEDFLSIVKTIPEPYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMDTTSGLANTFIGTYSYMSPERITGNPGGYNYRSDIWSLGLILLKCATGKFPYTPPDKKEGWENIYQLIEIIVEKPPPSAPSDQFSLEFCSFISACLQKNPRDRKSAPDLARHPFINMYEDLDVDLSAYFSNGGSTPATI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2006 313 CDD PKc_MAPKK_plant_like 61 293 - -
Ahy3g2006 313 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 57 313 - -
Ahy3g2006 313 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 56 - -
Ahy3g2006 313 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2006 313 Gene3D Phosphorylase Kinase; domain 1 54 106 - -
Ahy3g2006 313 Gene3D Transferase(Phosphotransferase) domain 1 107 309 - -
Ahy3g2006 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Ahy3g2006 313 SUPERFAMILY Protein kinase-like (PK-like) 63 294 IPR011009 -
Ahy3g2006 313 PANTHER MAP KINASE KINASE 1 56 - -
Ahy3g2006 313 PANTHER MAP KINASE KINASE 57 313 - -
Ahy3g2006 313 Pfam Protein kinase domain 66 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g2006 313 SMART serkin_6 34 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2006 Ahy-Chr3 44320657 44324158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2006 30 308 MAP Kinase Kinase Gene Family AT4G26070 54.938 2.94e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Ahy3g2006 Pkinase 1.40E-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2006 K20603 - gmx:100789241 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2283 13 47114563 47118465 Ahy3g2006 3 44320657 44324158 hybridization
Ahy11g3137 11 149023242 149027087 Ahy3g2006 3 44320657 44324158 PCT
Ahy1g1815 1 94389412 94393272 Ahy3g2006 3 44320657 44324158 PCT
Ahy3g2006 3 44320657 44324158 Ahy11g3137 11 149023242 149027087 PCT
Ahy3g2006 3 44320657 44324158 Ahy1g1815 1 94389412 94393272 PCT