Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2005 ATGGAGGAAATTACTTCGACGATTGCGGTGCCATACAGACTTGGGAATTTGATTCAGAAGGAGTCAACGGTGGCAACCCGCATGGAGATAACTGGTCTGAAGCTCATGGCAAACACAACAGCTTTGATATTAAATCCTACAATTGAAAGTCATCATCAATCTTACTCTGTTGGAAACGAAGACTACTGCGCAGATATATGTCCAAAACACCAAACTAGGTCATCTGCAGAGGTAAAGGAGAATCAGGGTCGAACCAACTCAGCTCCCCTTGAATCAAAAATGGTTACTGAATTTAAGGTGAAAGATGAATTCATGTCAGCTAACAGTTTTCATTCTGTACATAATCAAAGATCTGAATCTGTTGCCAGTGACAAAAGTTGTCCTGGGAATGAAGCTGCTACTTTGACTGATAATTGTTCTGATTCTGATAATGATTTGCCGATTGCCACCAAGTTTAATAGTAATATCCAAGGAAAGTCCAGTTCGATCGAGGCGAGTCCAGAGCTGGAGCCAGTGCAGAACATGGTTTCTGCTGCTATGGAACTTGAAACTGAAGATGGAAGCGGATCAGATGGATTTGATCCAAAACTATCTGCCAGTCTTCATGATGTGTCAGACAAGCAAACAAGCATAGCAGACTTCCAGAATGCATCGGAATCTGATGGAGGTCCTCGTTGGGGTTTCTCGTCAGTTTGTGGAAGGAGACAAGAGATGGAAGATGCTGTTGCTTGTCAGCCTCAACTTCTTCAAGTTCCTTCACAGATGCTAGCAGATGACCACGTTAATGAAAATGGAAACTCATCAGCCCACTTTTTCAGTGTCTATGATGGACATGGGGGTTGTCAGGTCGCGAATTACTGCCGGGAACATCTTCATTCAGTGTTGACTGAGGAGATAGAAGCTGCAAAATCTAATTTAAACAATGCGAGGGAGAAGTGGCAAGACCATTGGAAGAAAGCATTCTCTAATTGTTTTCATAAAGTAGATGATGCAGTTGGACGAATCGGGGCACCGGATAGTGAAAGCCATTGTGATGGATCTGAGGGTAGTATTGAACCCCTTACTCCTGAGACTGCAGGCTCTACTGCAGTGGTTGCTATTCTAACTGAAACCCACATTATAGTCGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGTGGAAAAGAAGCCATGCCTTTGTCTACTGACCACAAACCTAATAGAGAAGATGAATGGGAAAGAATAGAAGCTGCTGGAGGAAGGGTCATACAGTGGAATGGTTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGGATAATTCCAGAACCAGAAGTCATGTTTATTCGAAGACAGAAAACCGACGAGTGCCTTATTCTCGCCAGTGACGGTCTATGGGACATCATCACAAATGAAGAAGCCTGCAGCATTGCCCGAAGACGAATCCTCCTTTGGCATAAGAAGAATGGCAGCAACAACAACATCAGTGTATCAACAGAACATGGCCATGGCATTGATCCTGCAGCTCATTATGCTGCAGAATGTCTCTCTAAACTCGCCATCCAAAGGGGAAGCAAAGATAATGTCTCAGTCATTGTTATAGACCTAAAGGCCCAAAGAAAATTGAAGAAGAAAGCATAG 1650 0.4339 MEEITSTIAVPYRLGNLIQKESTVATRMEITGLKLMANTTALILNPTIESHHQSYSVGNEDYCADICPKHQTRSSAEVKENQGRTNSAPLESKMVTEFKVKDEFMSANSFHSVHNQRSESVASDKSCPGNEAATLTDNCSDSDNDLPIATKFNSNIQGKSSSIEASPELEPVQNMVSAAMELETEDGSGSDGFDPKLSASLHDVSDKQTSIADFQNASESDGGPRWGFSSVCGRRQEMEDAVACQPQLLQVPSQMLADDHVNENGNSSAHFFSVYDGHGGCQVANYCREHLHSVLTEEIEAAKSNLNNAREKWQDHWKKAFSNCFHKVDDAVGRIGAPDSESHCDGSEGSIEPLTPETAGSTAVVAILTETHIIVANCGDSRAVLCRGKEAMPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEVMFIRRQKTDECLILASDGLWDIITNEEACSIARRRILLWHKKNGSNNNISVSTEHGHGIDPAAHYAAECLSKLAIQRGSKDNVSVIVIDLKAQRKLKKKA* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2005 549 Gene3D - 214 549 IPR036457 -
Ahy3g2005 549 PANTHER ALPHABET, ISOFORM E-RELATED 142 548 - -
Ahy3g2005 549 SMART PP2C_4 215 537 IPR001932 -
Ahy3g2005 549 SUPERFAMILY PP2C-like 224 540 IPR036457 -
Ahy3g2005 549 ProSitePatterns PPM-type phosphatase domain signature. 271 279 IPR000222 GO:0043169
Ahy3g2005 549 ProSiteProfiles PPM-type phosphatase domain profile. 225 539 IPR001932 -
Ahy3g2005 549 Pfam Protein phosphatase 2C 227 532 IPR001932 -
Ahy3g2005 549 CDD PP2Cc 225 539 IPR001932 -
Ahy3g2005 549 MobiDBLite consensus disorder prediction 115 143 - -
Ahy3g2005 549 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 142 548 - -
Ahy3g2005 549 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2005 Ahy-Chr3 44316710 44320304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2005 224 548 PP2C-type Phosphatase Gene Family AT4G26080 59.021 4.49e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2005 K14497 - gmx:100802159 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2282 13 47110623 47114232 Ahy3g2005 3 44316710 44320304 hybridization
Ahy11g3136 11 149019600 149022885 Ahy3g2005 3 44316710 44320304 PCT
Ahy1g1816 1 94393603 94396871 Ahy3g2005 3 44316710 44320304 PCT
Ahy3g2005 3 44316710 44320304 Ahy11g3136 11 149019600 149022885 PCT
Ahy3g2005 3 44316710 44320304 Ahy1g1816 1 94393603 94396871 PCT