Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1998 ATGGGGTCCTGCAGCCGTGTTGTAGAGGGAACGTGCCAGTGGAATGTGAGGAGCAGGGATGATTGGGTTCAACGCAGCGGTGTAGGTTTAGATGAGCAGGAAACATTATATGACATGGGAATTGAAGCAGAGGAATACTTTCGTGACTATGCAAGTAAGGATGATGGTCGTAACAAAGGGTTCGATTCGGATGAAGGAGTGGGGCCAGATGATGTCCTTCGAATGGAATTTAACACTCCAGATGAAGCCAAATCCTTTTATAATAACTATAGCCGATTAAAGGGATTTTCTACGAGGCAAGGGAGGAAGGTAACAAATACTGCAGGGGATATTGTGCGATACACATTTGTGTGCAATAGGCAAGGGTATCGGGAGAAGAAATGGCTACAGATGGCTAATCGAAAACGGGAGCACAAGATTGTGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAGAAAAGATGGGAGTGGCAAATGGTACGTGTCTCGGTTTGTGGATGAGCATAATCATGAACTCGCATCTGGCAAGTTCGTCGATTACTTGAGGTCGCACAGGCGGCTATCTGAAGTAGAGATTGCACAAATGACTAGCTTGAGGGAGGTTGGTATCAGCATTCCTAAAATATATGAATCCTTCGCGGCACAGCTTGGGGGTTTTAACCTTGTGACATTCACAAAGCAAGACATGTATAATGAGGTGAGGCGACAAAGAGAACTGCAAAATGGAGATGTAAGCGCTGCAATTCGATACTTGGAAGGTGTTTCCCGTGTAGACAACAGAATATTTTGGAGGTACAAGGTTGGGTCTGAAAACAATCTTTGTGACCTATTTTGGAGTGACGGGCGCAGTCAGTTCGACTATGCAATATTCGGAGATGTTCTAGCCTTCGATGCTACTTATGGCCGAAACAAGTACAATTTGCCTGTTGTGTTCTCGGGAGTTAACCACCACAACCAAACATGTGTCTTCGGATGTGCAATGGTCTCGTGTGAAACACAAGAGTCCTACATCTGGGTTTTGCGGCAGTTTTTGGAATGCATGGAAGGAAAGGCCCCTAAGGCAGTCATCACAGATGGAGATACCTCGATGCGAAATGCTATACGTCATGTATTTCCCGAAACCCATCACAGGCTATGTGCTTGGCATTTGCTTCGTAATGCGACTTCCAATATATGTGACTCACAATTCACCCAGCTATTTAGACACTGCATGCTTGCGGACATGGAGGTTGATGAGTTCGAGGTGCAATGGGAGGCAATGCTGGATGAGTGTGGGGTTCGTGAAGTCGAATGGGTGAAGGATTTGTACCGCAAAAAAACTGCATGGGCGACAGCATACATCAGAGGCCAATTTTTTGCTGGAATACGGACAACGTCCCGTTGTGAATCTCTACATGCCAAGCTGGGCAGGTTTGTGGAGAGTAGATACGGGGTCCTTGAATTTGTCACAAACTTCCAAAGATGCATTGATTTCTTGCGAGACAATGAGGACGAGCTTGAATTTCGTTCATGGTACGGAACTCCAGTCTTGCAAACTGAGTTTGTTGAGCTTGAGAAGGATGGGTGGACAAAGTATACACGGGAGATGTTTTGGCGATTTCGTGAAGCTCTTAAAAGGTGCGTTCGAATTCACATATGTGGATGCAATAAAAATGCTGAGGGTGAAGTATATGTTGTTCAAAAATATCGCAGGCCGGAAAAGAAGTGGGAGGTTTTGAGGCAAAATGTGGGTAACAAATTCAGCTGCACCTGCCTGAGAATGGAATCATTTGGACTGCCCTATGTCCACATACTAGCTGTGTTGGTGCGCTTGGATTATACTATCATTCCCAATACGCTTGTGCTCCGCAGATGGTCGAAGACAGCAAAGTTGCACTATGGCTTAAATTGCACTAGAAATGAAACACAGGAGCAAACAACAACGTATAGGTCCCGGTTGGGAGCTTTTGCTCAGCTATGCACACGACTTGGCCGGGTTGCATGCATGAGCGATGAGGACTTTAAGTACTACTCACATAAGGTACTAACTGACACTATCTGCCTGGAAATTAAGAATGGCCTCAGGCCCCCGGAAGACGTAGGACTAACGGCGGAGGAACAACGAGTGAAGGACCCCATCAGCGTGAGAACAAAGGGTACTGGTCGACTCAGCCAGGCATCTGCATCGACCGGGAAAAAACGACGCAAGTGCAGCAACTGTGGCCGACTCGGTCATCGAAGGACCCGTTGTCCAAATCGTGCAGGTCAGGAGGGTGGCCAACCGTGTGTGGGCGTGAATAAGAGAGTTCGAGGTACCCAGGTGGTGCAGGAGGATGCTCCTTCCAACAACCCGGAGGCTGTGTCACTTGGCGACCTTTGA 2364 0.4725 MGSCSRVVEGTCQWNVRSRDDWVQRSGVGLDEQETLYDMGIEAEEYFRDYASKDDGRNKGFDSDEGVGPDDVLRMEFNTPDEAKSFYNNYSRLKGFSTRQGRKVTNTAGDIVRYTFVCNRQGYREKKWLQMANRKREHKIVTRCGCLAEMRIKRKDGSGKWYVSRFVDEHNHELASGKFVDYLRSHRRLSEVEIAQMTSLREVGISIPKIYESFAAQLGGFNLVTFTKQDMYNEVRRQRELQNGDVSAAIRYLEGVSRVDNRIFWRYKVGSENNLCDLFWSDGRSQFDYAIFGDVLAFDATYGRNKYNLPVVFSGVNHHNQTCVFGCAMVSCETQESYIWVLRQFLECMEGKAPKAVITDGDTSMRNAIRHVFPETHHRLCAWHLLRNATSNICDSQFTQLFRHCMLADMEVDEFEVQWEAMLDECGVREVEWVKDLYRKKTAWATAYIRGQFFAGIRTTSRCESLHAKLGRFVESRYGVLEFVTNFQRCIDFLRDNEDELEFRSWYGTPVLQTEFVELEKDGWTKYTREMFWRFREALKRCVRIHICGCNKNAEGEVYVVQKYRRPEKKWEVLRQNVGNKFSCTCLRMESFGLPYVHILAVLVRLDYTIIPNTLVLRRWSKTAKLHYGLNCTRNETQEQTTTYRSRLGAFAQLCTRLGRVACMSDEDFKYYSHKVLTDTICLEIKNGLRPPEDVGLTAEEQRVKDPISVRTKGTGRLSQASASTGKKRRKCSNCGRLGHRRTRCPNRAGQEGGQPCVGVNKRVRGTQVVQEDAPSNNPEAVSLGDL* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1998 787 Pfam MULE transposase domain 295 388 IPR018289 -
Ahy3g1998 787 SUPERFAMILY Retrovirus zinc finger-like domains 712 752 IPR036875 GO:0003676|GO:0008270
Ahy3g1998 787 PANTHER OS02G0262500 PROTEIN 71 645 - -
Ahy3g1998 787 ProSiteProfiles Zinc finger CCHC-type profile. 730 747 IPR001878 GO:0003676|GO:0008270
Ahy3g1998 787 Pfam FAR1 DNA-binding domain 85 175 IPR004330 -
Ahy3g1998 787 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 645 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1998 Ahy-Chr3 43526643 43535429 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1998 MULE 6.60E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1998 - - aip:107620408 1122.07