Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1986 ATGGCATCATCAAGCTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGGAAGTGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAAGAACCCCAAAAATTCGCCAATGTTCACAAGATCTTCGGCGCGAGCAATGTCACCAAGCTTCTCAACGAGCTTCTGCCTCAGCAGAGGGAAGACGCAGTGAATTCCCTCGTGTACGAGGCAGAAGCTCGTGTGAGAGACCCTGTTTACGGCTGCGTTGGCGCCATCTCTTACCTTCAGAGACAAGTCCAGAGACTTCAGAAGGAACTTGATGCTGCCAACGCGGATCTTCTTCGCTACGCTTGCAACGAAATCCCTCCTCCACACCATCATGTCCCAACCTTGGCACCACCATTAACTCCCACAATTCATCATCAACTCACACAAAGGCACTTTGGTGGTGCAAGAATTGGCAATGATCATGGAATTGGATTTTATAGGCAATCTCCAACCACTTATTCCTTCCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCAGAAGGAGGAGGTAATTTATGA 570 0.4825 MASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLVYEAEARVRDPVYGCVGAISYLQRQVQRLQKELDAANADLLRYACNEIPPPHHHVPTLAPPLTPTIHHQLTQRHFGGARIGNDHGIGFYRQSPTTYSFPYSLPWNEDINGGGAEGGGNL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1986 189 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Ahy3g1986 189 PANTHER ELONGATED PETIOLULE 1 1 185 - -
Ahy3g1986 189 Coils Coil 89 116 - -
Ahy3g1986 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 185 - -
Ahy3g1986 189 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1986 Ahy-Chr3 43377816 43380288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1986 1 113 AS2 family AT5G63090 92.982 1.76e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy3g1986 LOB 2.20E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1986 - - gmx:100799774 278.87