Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1982 ATGGGTCGGCATTCTTGTTGTTTAAAGCAAAAACTAAGGAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTCTTCAACTACATTTCTAGGTTTGGTGTTGGTTGCTGGAGTTCAGTTCCCAAACAAGCTGGGCTACAAAGATGTGGAAAGAGTTGTAGATTAAGATGGATAAATTATTTGAGGCCTGATTTGAAGAGAGGCATGTTTTCTCAACAAGAGGAGGATCTTATAATCACTCTCCATGAGGTTCTTGGAAATAGGTGGGCACAGATTGCAGCACAGTTACCAGGAAGAACAGATAATGAGATAAAGAATTTCTGGAATTCATGTCTGAAGAAGAAGCTAATGAAGCAAGGGATTGATCCAACTACACACAAGCCTCTTCATAATCATGAAGAAGACAAAGATAATGATATTAATAATAATAATAATAATAATAATACAACAACACAAGCAGCATGTTCTTCTTCTTCTTCTTCCATGGCAATGTTAGATGGAATTATTGGAGGAGTTTCATCATTATCATCATCATCATTATTATTAGACCCTTTGACATGCTTGGATTTTTCTCATCATCATCATGAAAACTATGGATTATTATTCTCTTCAATGCCAAGCCTAGAAATGAATAATAATAATAATAATAATAATGCATTGCTCTCATCAACATCATCATGGGATTGTTGTAGTAATGAAGAGGAGAATAACAAGTTAGAATCTTTGTTTCAGTTTCATCATCAACAAGTCAATGCAATCAAATCTGAGCAGGAATTCAATACAAATTATAATAATGTGCAGCAGAATTCAATGCAAGAAGATTTCATCAGCAGCTATAATAATTTAAGGTCACTCTCATCAGAAGATCTATCAGCAGCAGCAGCAGGACCAAATTTTGATGTATTCCACCAGATATGA 918 0.3497 MGRHSCCLKQKLRKGLWSPEEDEKLFNYISRFGVGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIITLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPTTHKPLHNHEEDKDNDINNNNNNNNTTTQAACSSSSSSMAMLDGIIGGVSSLSSSSLLLDPLTCLDFSHHHHENYGLLFSSMPSLEMNNNNNNNNALLSSTSSWDCCSNEEENNKLESLFQFHHQQVNAIKSEQEFNTNYNNVQQNSMQEDFISSYNNLRSLSSEDLSAAAAGPNFDVFHQI* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1982 305 MobiDBLite consensus disorder prediction 141 155 - -
Ahy3g1982 305 PANTHER MYB-RELATED PROTEIN HV33-LIKE 1 156 - -
Ahy3g1982 305 CDD SANT 70 109 IPR001005 -
Ahy3g1982 305 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy3g1982 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy3g1982 305 PANTHER MYB DOMAIN PROTEIN 55 1 156 - -
Ahy3g1982 305 CDD SANT 17 61 IPR001005 -
Ahy3g1982 305 Gene3D - 11 67 - -
Ahy3g1982 305 MobiDBLite consensus disorder prediction 122 140 - -
Ahy3g1982 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Ahy3g1982 305 MobiDBLite consensus disorder prediction 122 155 - -
Ahy3g1982 305 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Ahy3g1982 305 SMART sant 13 63 IPR001005 -
Ahy3g1982 305 SMART sant 66 114 IPR001005 -
Ahy3g1982 305 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy3g1982 305 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy3g1982 305 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy3g1982 305 Gene3D - 69 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1982 Ahy-Chr3 43290126 43291967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1982 1 138 MYB Transcription Factor Family AT4G01680 81.159 1.54e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy3g1982 Myb_DNA-binding 7.30E-14 CL0123