Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1979 ATGGAAACGAGTCCCGGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGCAAGATCCTCCCACGCGCTACCGACGGCGAGCTCCGTTACATCGGTGGCCACACCAGAGTCCTCACCGTGGATCGTTCCATTTGCTTCTCAGACTTGTTGGTAAAGCTAGGAGAGTTGTGCGGTTCGTCTGTGACGTTACGGTGTCAATTGCCGAACGGAGATTTAGAAACCTTGATCTCCGTCACCAACGACGAAGATCTGACGCACATAATTGAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAAGATCAGAGCCGTGCTGTTTCCGCCAAAATCATCGAGGAAGGTTTCTCCGGCGACGTCGTCTCCGTCGTTGTCTTCCTCTGCTTCATCCAGCGCCAGTCACTCGCCAGCAAGATCTCCGTACACATCCGCGGAATCGCTGCCGCATGCGGCGGCGTATCGCGTCGTCCGCCAAAGCCGTCCTGTCCCGATCCGTAACGGATCGGCGAAAGCGTGTTGCTACAACGGCCAGCTAGAAGGAAGCCCTAGGTTTCTTTATTACGGACCTCGCTTCAGTAATTATTGCCATTGA 597 0.5477 METSPGRTIKLLCSYGGKILPRATDGELRYIGGHTRVLTVDRSICFSDLLVKLGELCGSSVTLRCQLPNGDLETLISVTNDEDLTHIIEEYDRASSKLPHPLKIRAVLFPPKSSRKVSPATSSPSLSSSASSSASHSPARSPYTSAESLPHAAAYRVVRQSRPVPIRNGSAKACCYNGQLEGSPRFLYYGPRFSNYCH* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1979 198 CDD PB1_UP2 12 109 - -
Ahy3g1979 198 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Ahy3g1979 198 MobiDBLite consensus disorder prediction 115 144 - -
Ahy3g1979 198 SUPERFAMILY CAD & PB1 domains 25 117 - -
Ahy3g1979 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 198 - -
Ahy3g1979 198 Gene3D - 30 107 - -
Ahy3g1979 198 PANTHER PB1 DOMAIN PROTEIN 1 198 - -
Ahy3g1979 198 MobiDBLite consensus disorder prediction 113 145 - -
Ahy3g1979 198 SMART PB1_new 23 109 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1979 Ahy-Chr3 43237733 43240019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1979 9 114 MAP Kinase Kinase Kinase AT1G04700 47.170 7.24e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1979 - - gmx:100797123 260.766