Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1963 ATGGTAACAATCTTAGGTACTCATACAGTGATCCCAAAAGAAGAAACTCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTCTGGCGATGGAGTCATACACCTTCAATCTACGTTTACAAGTCAAAACAGAACAACAACACTGTCCTCGTTGAGAGAATGCGAGATTCTCTCAGCGAGATTCTCGTTCATTACTATCCGTTGGCCGGGAGGCTCAACTGGACGGCCGGCGGTCGTTTGGAACTCGATTGCAACGCAAACGGAGCCTTGCTTCTCGAGGCCGAATCCAAGAAATCAATGGCGGAATACGGAGACTTCACACCAAACCAACCCGGCATCAAAGAACTCATCCCAGCCGTTGATTACTCTCGTCAAATGAACGAGCTTCCTTTGTTCTTGGCACAGGTAACGAAGTTCCACGGCGGCGATGGCGGTTTCGCAGTCGGAATCCTTTGGTCTCATCCATTAGGCGACGGCCTGGCCGCCATTCGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGAGCCAAGTTAGATCCAAGTGAGCTTCCGTTTCTCGACAGATCTGCGCTCAAATCAACTGAGCCATTAACTTCACCCCGGTTCGACCACCGGGAGTTCAAGCCTCTGCCGCTCATCCTCGGAAGAACCGACAATATCGAAGAGCAAAAGAAGAAGACGACGTTCGCGCTGTTAAAACTCACATCAGAACATGTCCAGAAGCTCAAAAAGAATGCAATCGTAACTGAAAACGGAAACGGTAACGGTAACGGTAACGGTCCTCATAACCAATCTCAGAGACCGTACAGCAGATTCGAAGTTATCAGCGCGCATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTGAAGAGAATCAACCAACGGTGGTTAAATTCAACGTCGATATACGAAACAGAATGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACGCCAACTTGCTACCTCAAAGAAATCACGTCTCAACCGATTAGTTACGCGGCGCAGAAAATAAGAGAAGCCGTTAAGAAAGTGTCGAATCACGAGTTTGTTAAATCACAAATGGATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGGACACCGTACTTGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAATATTATACTTGGAAGTTGGATGAGTATGCCGTTTTATGAAGCTGATTTTGGGTTGGGGAAACCGTTTTATTTTGGTCCTGCTGGTGTGTGCCCTTATGATAGAGCAGTTATTGCTCTAATGCCAGATGAAGATGGTGATAATGGATATGCTGTGGTGGTGTACATGCATTTTCAGGTGGAACACATGAAAGATTTCATCAAGTACTTTTGGGAAGATATTTGA 1413 0.4664 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYVYKSKQNNNTVLVERMRDSLSEILVHYYPLAGRLNWTAGGRLELDCNANGALLLEAESKKSMAEYGDFTPNQPGIKELIPAVDYSRQMNELPLFLAQVTKFHGGDGGFAVGILWSHPLGDGLAAIRFINSWAKLTRGAKLDPSELPFLDRSALKSTEPLTSPRFDHREFKPLPLILGRTDNIEEQKKKTTFALLKLTSEHVQKLKKNAIVTENGNGNGNGNGPHNQSQRPYSRFEVISAHIWRCACKARNLEENQPTVVKFNVDIRNRMNPPLPQNYFGNALGPTVTPTCYLKEITSQPISYAAQKIREAVKKVSNHEFVKSQMDYVAGFENRWDLIRTPYLEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPAGVCPYDRAVIALMPDEDGDNGYAVVVYMHFQVEHMKDFIKYFWEDI* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1963 470 Gene3D - 1 210 IPR023213 -
Ahy3g1963 470 Gene3D - 217 469 IPR023213 -
Ahy3g1963 470 Pfam Transferase family 1 464 - -
Ahy3g1963 470 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 470 - -
Ahy3g1963 470 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1963 Ahy-Chr3 43069825 43071512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1963 2 468 Monolignol Biosynthesis Gene Families AT5G48930 33.191 1.23e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1963 K13065 - gmx:100779814 506.908