Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1962 ATGGCTTTTCTACAACTTCAATCAATACTAAAACAATATTCCTCTTATTATTATTATTATGAGCAACATTACTCAACCCTTTACTACTTAGCCATTTTTGGCTTCATAACCATCTTTCTTGTGCTTAATTTCACAATAACAAAAAAAGGACGAAAATCCAATAATCTTCCACCATCACCACCAAAGCTACCATTCATTGGAAACCTTCATCAACTAGGAACATTGCCCCACCGTTCCTTCCATGAACTCTCAAAGAAGCATGGCCCTCTCATGTCCCTTCAACTTGGACAAACACCAGCCATTGTTGTTTCTTCGGTTGATGTGGCCAAAGAAATCATCAAAAACCATGATGTTGTTTTCTCCAACAGGCCCCAAACAACATCCGAGAGAATCATTATGTATGGATGCAAGGATGTTGCTTTTGCACCCTATGGTGACGAGTGGAGACAGAAAAGAAAAATTTGTGTTCTTGAGCTTCTAAGCCTTAAAAGAGTGCGATCCTTTCAATCCATTCGTGAAGAGGAGGTTGCCGAATTGGTTGATAGCTTACGTGAAACATGTGGAAGCAACAAAGAGTCATGTGTGAACCTTAGTGAGTTGATAATTGCAACATCAAACAACATAGTGTCAAGATGTGTTCTTGGACAAAAGTATGATAATAATCCAGATGGTAGTGGCAGCTTTGGAGAGCTTGGAAGGAAGATGATGAGAGAATTGGCTGCTTTTAGTGTGGGAGATTTCTTCCCTTTCTTGGGTTGGCTTGATTTTCTCACTGGCCAAATACAAGAATTCAAGGCCACTTTTCATGCATTAGATTGTTTCTATGATAAGGTACTTGAAGAACATAGGAGGATGATTAAGAAAGGAAATGATGATAAGAAAGACTTTGTTGATTTACTGCTTCAAGTTCAAGAGGATGGTGTGCATCATGATTTTCACCTCTCCAATGATAATCTCAAAGCAATCCTAATGGACGTGTTTGCCGGAGGTGGTGACACTACTTCAACACTTTTGGAGTGGACATTTGCAGAACTGATTAAGAATCCAAAGATCATGAAGAAAGTTCAAGAAGAAGTAAGAAATGTTGTTGGGTATAAACAAAAGATAGATGAAAATGATGTGAATGAAATGGAATACATGAAATGTGTGATCAAAGAAATTCTAAGATTGCATCCACCTGCTCCTTTATTAATACCCCGTGAAACCCTAAGTGATGTGAAGCTAAAAGGTTATGATATTCCATCAAAGACAAAGGTATATTTGAATGCATGGACAATTCAAAGAGACCCCGAAATTTGGAACAACCCTGAAGAGTTCATTCCTGAGAGATTTGAGAAAAGTCAAATTGATTTTATGGGTCAACATTTGGAACTTATACCCTTTGGTTTCGGAAGAAGGGGTTGTGCTGGAATTTCATTTGCAATTGCTTCCACTGAACATATTCTTGCTAATCTTCTATGTTGGTTTGATTGGAAGCTGCCCAATAATAATAATAATGATGATGATGATGTTGGTGTCACTAAAATGCAAGACATTGATATGTGTGAGATTTATGGGCTCACTGTTTGCAAGAAAGTACCATTGCATCTTCAGCCTAAACTATACAATCATATGGGGAAGTAA 1623 0.3777 MAFLQLQSILKQYSSYYYYYEQHYSTLYYLAIFGFITIFLVLNFTITKKGRKSNNLPPSPPKLPFIGNLHQLGTLPHRSFHELSKKHGPLMSLQLGQTPAIVVSSVDVAKEIIKNHDVVFSNRPQTTSERIIMYGCKDVAFAPYGDEWRQKRKICVLELLSLKRVRSFQSIREEEVAELVDSLRETCGSNKESCVNLSELIIATSNNIVSRCVLGQKYDNNPDGSGSFGELGRKMMRELAAFSVGDFFPFLGWLDFLTGQIQEFKATFHALDCFYDKVLEEHRRMIKKGNDDKKDFVDLLLQVQEDGVHHDFHLSNDNLKAILMDVFAGGGDTTSTLLEWTFAELIKNPKIMKKVQEEVRNVVGYKQKIDENDVNEMEYMKCVIKEILRLHPPAPLLIPRETLSDVKLKGYDIPSKTKVYLNAWTIQRDPEIWNNPEEFIPERFEKSQIDFMGQHLELIPFGFGRRGCAGISFAIASTEHILANLLCWFDWKLPNNNNNDDDDVGVTKMQDIDMCEIYGLTVCKKVPLHLQPKLYNHMGK* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1962 540 Gene3D Cytochrome P450 42 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 SUPERFAMILY Cytochrome P450 57 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 27 534 - -
Ahy3g1962 540 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 Pfam Cytochrome P450 57 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1962 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Ahy3g1962 540 PANTHER CYTOCHROME P450 71B11-RELATED 27 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1962 Ahy-Chr3 43043987 43047226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1962 38 532 Cytochrome P450 AT3G26280 43.825 2.91e-142 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1962 K20617 - gmx:100792382 615.92