Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1960 ATGGAACTTGTTCTATCATCAATTCTAGAGAAATTGCAACATCAACCAAATTCATCAACCCTCTCTACCATATGTTTCATAATCATAAGCATCTTGTGTATTCTTAGGTTCACAAGAAGAAACAACAAGTTCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCTTTAAAGGCACTTTCTCACAAATATGGCCCTCTTTTGTTGCTTCAATTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCATCAGATCTTGTTGAAGAGATAGTGAAAACACATGATGTTGCTTTCTCCAATAGAGCAAATACTAAAGCTTCAAAGGTATTCTTCTATCAATGCAAGGAGATTGGTTTTGCACCCTATGGAGAGGAATGGAGAAGGAAAAGGAAGTTGTGTGTTCTTGAGCTTCTAAGCACAAATAGGGTAAAGTCGTTTCAACCCATTAGAGAAAATGAAGTATTAATGATGATTAATTCTATACATGAAGCTTGTACAAAAGGATCGTCAGTGAATCTATCTAAGATGATTGCTGCAACATCAATGAACATATCTAGTAGGTGCATTTTCGGACTAAGGTTCGAAACAAGTGATGATGGTAGAAAAAGCATTGTGGAGGTTGTGAGGAAGATGATGACACAATTATCAAAACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCACGTCAAGATTAAAGGTTATTCATGCTGATTTTGATACGTTCTTAGAAGAGATTATTGAAGAACATAAGAGAAAGAAGAGAAATTGTGATGATAATAATAAAGACTTTGTTGATGTACTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCAATGGAGATACCATGAAAGCACTCCTTGTGGATATGTTTGTTGCGGGAAGTGACACTGTTTCAACAACTATTGAATGGGTCTTTGCAGAACTTGCTAATAATCCAAAGACCATGAAAAAAATACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAAGAAAATGACCTAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGGTACCACATTCCCAAAAAAGTAACCGTGTATATAAATTCATATGCAATTCATAGAGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTACCCAACAAGCTGATTATAAGGGAATAGGTTTTCAATTGATCCCATTTGGAATTGGGAGAAGGGCTTGTCCCGGAGTTTCATTTGCAGTTGCTTCTCTTGAGTATGTGATGGCTAATCTTCTCTATTTATTTGATTGGAAGGTTCCTAATAATAATGGTGCATTGATAGATATGAGTGAGTTGAGTGGGTTAACCATTAGCAAAAAACATCCACTTTATTTAGAGCCAATGCCTTACTTAATTTGTTGA 1551 0.3636 MELVLSSILEKLQHQPNSSTLSTICFIIISILCILRFTRRNNKFNNLPPSPPKLPLIGNLHQLGTLPHQSLKALSHKYGPLLLLQLGQTQALVVSSSDLVEEIVKTHDVAFSNRANTKASKVFFYQCKEIGFAPYGEEWRRKRKLCVLELLSTNRVKSFQPIRENEVLMMINSIHEACTKGSSVNLSKMIAATSMNISSRCIFGLRFETSDDGRKSIVEVVRKMMTQLSKLGVGDLFPSLDWVDVLTGFTSRLKVIHADFDTFLEEIIEEHKRKKRNCDDNNKDFVDVLLQLQERDMLEFELNGDTMKALLVDMFVAGSDTVSTTIEWVFAELANNPKTMKKIQEEVRRIVGGKSMIEENDLNQMKYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGTQQADYKGIGFQLIPFGIGRRACPGVSFAVASLEYVMANLLYLFDWKVPNNNGALIDMSELSGLTISKKHPLYLEPMPYLIC* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1960 516 Coils Coil 264 284 - -
Ahy3g1960 516 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 20 512 - -
Ahy3g1960 516 SUPERFAMILY Cytochrome P450 48 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 Gene3D Cytochrome P450 33 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Ahy3g1960 516 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PANTHER CYTOCHROME P450 71B11-RELATED 20 512 - -
Ahy3g1960 516 Pfam Cytochrome P450 48 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1960 516 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1960 Ahy-Chr3 43008958 43012370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1960 41 514 Cytochrome P450 AT3G48280 41.176 5.18e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1960 K20617 - aip:107632412 600.512