Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1959 ATGGAAGTTGCTCTATCAATTGTAGAGAAATTGCAACATCAACCAAATTCAACCCTCTCTACCATATGTTTCATAATCATAACCATTTTGTGTGTCCTTATTAATAAGTTCACAAGAAGAAACAACAAGTTCAATAAACTTCCACCATCTCCACCAAAGCTACCAATAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCCTTAAAAGCACTTTCTGACAAATATGGCCCTATTTTGTTGCTTCAATTAGGGCAAACTAAAGCACTAGTTGTGTCTTCAGCAGATATTGTTGAAGAAATAGTGAAAACACATGATGTTGCTTTCTCCAATAGAGCAAACACTAAAGCTGCCAAGGTATTATTCTATCAATGCAAGGAGATTGCTTTTGCACCCTATGGAGAGGAATGGAGAAACAAAAGGAAGCTCTGTGTTCTTGAGCTTCTAAACACAAATAGGGTGAAGTCCTTTCATCCCGTTAGAACAAATGAAGTATCAACAATGATTAACTCCATACATGAAGCTTGTGCAAAAGGGTCATCAGTGAATCTCTCTAAGCTGATTATTGTAACCTCAAGCAACATATCTTATAGGTGCATTTTCGGGCTAAGGTTCGAAACTAGTGATGATGGTCAGAAAAGCATTGCTGAGGTTGTGAGGAAGATGATGTCACAATTTTTAAAATTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCATGTCAAGATTAAAGGTTACTTTTGCTGAATTAGATGAGTTCTTAGAAGAAGTCATTGAAGAGCATAAGAGAAAGAAAAGAGATGAGAATAATAAAGACTTTGTTGATATACTTCTTCAACTTCAAGAGAGGGACATGCTTGACTTTGAGCTCAATGGAGATACCATGAAAGCACTCCTCTTGGACCTGTTAGTTGCAGGAAGTGACAGTATTTCATCAACTATTGAATGGGCCTTTGCAGAACTTGCTAACAGTCCAAAGGTCATGAAGAAAGTACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAGGAAAATGATCTAAATCAAATGAACTACATGAAGTGTGTAATTAAAGAAACTCTTAGATTACATCCACCAGGTCCATTTTTAATTCCAAGAGAGACAGCAAATAGTGTGGAAATAAAAGGGTATCACATTCCCAAAAAAGTAACAGTATATATAAATTCATATGCAATTCATAGAGATCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGCAACCAACAAATTGATTACAAGGTGATAGATTCTCAATTTATTCCATTTGGTATTGGGAGAAGGGGTTGTCCTGGAATGTCATTTGGAGTTGCTTCTCTTGAGTATGTGATTGCTAATCTTCTTTATTGGTTTGATTGGAATGTTCCTAATAATAATAATAGTGCATTGATAGATATGAGTGAGATAAGTGGGTTGAACATTAGCAAGAAACAACCACTTTATTTGAAGCCAATACCTTACCAACCAAATTCTTTCTCTCAGACTGTATCATGA 1569 0.3607 MEVALSIVEKLQHQPNSTLSTICFIIITILCVLINKFTRRNNKFNKLPPSPPKLPIIGNLHQLGTLPHQSLKALSDKYGPILLLQLGQTKALVVSSADIVEEIVKTHDVAFSNRANTKAAKVLFYQCKEIAFAPYGEEWRNKRKLCVLELLNTNRVKSFHPVRTNEVSTMINSIHEACAKGSSVNLSKLIIVTSSNISYRCIFGLRFETSDDGQKSIAEVVRKMMSQFLKFGVGDLFPSLDWVDVLTGFMSRLKVTFAELDEFLEEVIEEHKRKKRDENNKDFVDILLQLQERDMLDFELNGDTMKALLLDLLVAGSDSISSTIEWAFAELANSPKVMKKVQEEVRRIVGGKSMIEENDLNQMNYMKCVIKETLRLHPPGPFLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGNQQIDYKVIDSQFIPFGIGRRGCPGMSFGVASLEYVIANLLYWFDWNVPNNNNSALIDMSEISGLNISKKQPLYLKPIPYQPNSFSQTVS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1959 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Ahy3g1959 522 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PANTHER CYTOCHROME P450 71B11-RELATED 23 511 - -
Ahy3g1959 522 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 Coils Coil 261 281 - -
Ahy3g1959 522 Pfam Cytochrome P450 48 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 23 511 - -
Ahy3g1959 522 SUPERFAMILY Cytochrome P450 48 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1959 522 Gene3D Cytochrome P450 32 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1959 Ahy-Chr3 42991336 42997043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1959 26 512 Cytochrome P450 AT3G26300 40.733 1.20e-134 398