Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1956 ATGGAATTTGTTCTATCATCAATTGTAGAGAAATTGCAACATCAACCAAATTCAGCACTCTCTACCATATGTTTCATAATCATAAGTATCTTGTGTATTGTTAAGTTCACAAGAAGAAACAAGAAGATCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCTTTAAAGGCACTTTCTAAAAAATATGGCCCTCTTTTGTTGCTTCAATTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCAGCAGAACTTGTTGAAGAAATAGCAAAATCACATGATGTTGCTTTCTCCAATAGAGCAAACAATAAAGCTGCAAGGGTTTTCTTCCATCAATGCAACGAGGTTGCTTTTGCACCCTATGGAGAGGAATGGAGAAAAAAAAGGAAGCTCTGTGTTCTTGAGCTTCTAAGCACAAATAGGGTAAAGTCCTTTCAACCCATTAGAGAAAATGAAGTATTAATGATGATTAATTCTATCCATGAAGTTTGTGCAAAAGGGTTGTCAGTGAATCTATCTAAGATGATTATTGCAACATCAACAAACATATCTAGTAGGTGCATTTTCGGGCAAAGGTTCGAAACCAGTGATGATGGTAGAAAAAGCATTGCTAAGGTTCTGAGAAAGATGATGTCACAATTAACAACACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCATGTCAAGATTAAAAGTTACTTTTGCTGAATTAGATGCGTTTTTAGAAGAGGTTATTGAAGAGCATAAGAGAAAGAAAAATTGTGATGATAATAATAAAGATTTCGTTGATGTACTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCAATGGAGATACCATGAAATCACTCCTCTTGGATTTGTTTGTTGGGGGAAGTGACACTGTTTCAACAACTATTGAATGGGCCTTTGCAGAGCTTGCTAATAATCCAAAGATCATGAAGAAAGTTCAAGAAGAGGTAAGAAGAATTGTGGGTGAAAAATCCATGATAGAGGAAAATGATCTAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGGTACCACATTCCCAAAAAAGTAACCGTATATATAAATTCATATGCAATTCATAGAGATCCTAAATTATGGGACAATGCTGAAGAATTTATTCCTGAAAGATTTGAAGGTAACCAACAAGTTGATTATAAGGTGATAGATTTTCAATTGATCCCATTTGGTTTTGGGAGGAGGGGCTGTCCTGGAATTTCATTTGGGGTTGCTTCTTTTGAGTATATGATGGCTAATCTTCTCTATTGGTTTGATTGGAAGGTTCCTAATAATAATAATAATAATGGTGCATTGATAGATATGAGTGAGTTTAATGGGTTGAGCGTTACCAAGAAACAACCACTTTATTTGGAGCCAATGCCTTACTTAATTTGTTAA 1554 0.3578 MEFVLSSIVEKLQHQPNSALSTICFIIISILCIVKFTRRNKKINNLPPSPPKLPLIGNLHQLGTLPHQSLKALSKKYGPLLLLQLGQTQALVVSSAELVEEIAKSHDVAFSNRANNKAARVFFHQCNEVAFAPYGEEWRKKRKLCVLELLSTNRVKSFQPIRENEVLMMINSIHEVCAKGLSVNLSKMIIATSTNISSRCIFGQRFETSDDGRKSIAKVLRKMMSQLTTLGVGDLFPSLDWVDVLTGFMSRLKVTFAELDAFLEEVIEEHKRKKNCDDNNKDFVDVLLQLQERDMLEFELNGDTMKSLLLDLFVGGSDTVSTTIEWAFAELANNPKIMKKVQEEVRRIVGEKSMIEENDLNQMKYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGNQQVDYKVIDFQLIPFGFGRRGCPGISFGVASFEYMMANLLYWFDWKVPNNNNNNGALIDMSEFNGLSVTKKQPLYLEPMPYLIC* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1956 517 Pfam Cytochrome P450 47 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Ahy3g1956 517 SUPERFAMILY Cytochrome P450 47 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 Gene3D Cytochrome P450 31 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy3g1956 517 PANTHER CYTOCHROME P450 71B11-RELATED 21 513 - -
Ahy3g1956 517 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 21 513 - -
Ahy3g1956 517 Coils Coil 338 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1956 Ahy-Chr3 42972420 42976463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1956 17 515 Cytochrome P450 AT3G26300 40.954 2.04e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1956 K20617 - aip:107632412 639.417