Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1933 ATGGCTTCCCAAAATCCTATCTTCTTCTTTCTCTTTCTCTTGTTATTCTTCTTCTCCTCTTCAATAATCAAAGCCAAGCTTGATCTCCACCCTTCAGACCTCACCGCCTTTAGAACCCTCCAAAGAGACCTTGGTCTCAATGCACTTTTAGTCAACGGTCAACGCTTCCACCCATGCACCATCGAAGGTGTGTTCTGCGAGAGAAGGCTCTCCACCAACGACACCGCCACAGCCACCTACGTCCTCCGCATCACGCGCCTTCTTTTCACCTCCAAGAATCTCAATGGAACCCTCTCTTCCGCCATTGGACACCTCACTGAACTTAAAGAACTCTCTCTATCTGATAACCACCTCGTTGACCGCATCCCAAACTCCATAGTCAACCTCAAGAAGCTCGAAATCCTCGACCTCCGTGGCAACGGCTTCTCCGGCGAAGTCCCGCCTCGCCTTTCTTCCCTTGCAAGGCTCCGAGTCCTCGACGTCTCCTCCAACAAACTCTCCGGCAACCTCAACTTCCTCAAGTATTTTCCGAACCTGGAAAAGCTAAACGTCGCCGACAACCTCTTTGTTGGTCGTGTCCCGGTTTCTGTTCGCTCGTTTCGGAACCTCAGACACTTCAACTTCTCCGGCAACAGTTTCCTCGAAGGCTCGACGCCGATTGTTCCACGACGCTTCATCTTCGCCGAGGACGACGGAGAGAGCAACGACGGCATAACCGCTCTCGCGCCATCTCCGAGATCAAACAAAAGGAGGAGGAGGAGCTACTTTCCCAGCGCTTCTTCTCCGGCTCCCGGACCGGCACCTCACCACCACCACCACAACAATCACAGGAGAAAGATTCTGGGATGGATCCTCGGTTTTCTGGCCGGAGCATTTGCAGGAATAATATCCGGTTTCATATTCTCATTGCTTTACAAACTGACAAAGGCATTACTGAAAAGAGGAGGCAAAGGCGCTGGCCCTGATATCTTCAGCCCTCTGATCAAGAAAGCCGAGGATTTGGCATTCTTGGAGAAAGAAGATGGTTTGGCGAACTTGGAACTCATCGGAAAAGGTGGCTCCGGCGAGGTTTACAAGGCGGAGTTACCAGGAAGCGACGGAAAAATGATTGCCATAAAAAAAATCATACAACCACCGAAGGATGCGAGTGAAATGGCGGAAGAAGAGAGCAGAGATTTGCATAAAAAGATGAGACAAATCCGGTCGGAAATCAACACAGTCGGCCATATCAGACACCGGAATCTGTTACCCCTTCTTGCTCATGTTTCCCGCCCTGATTCTCACCTCTTGATTTATGAATACATGAAGAATGGAAGCTTGCAAGATTTGTTACACAGAATTCAAGAGGGAAATCAGGAACTGGACTGGTTATCAAGGCACAAGATCGCCATTGGAGTAGCTTCTGGACTTGAGTACCTTCACATGAGTCATAGTCCAAGAATCATTCATAGAGATCTCAAACCAGGAAACATTCTTCTTGATGATGATATGGAAGCTAGGATCTCCGATTTCGGTCTTGCAAAAGCAATGCCTGATGCTCAAACTCACATTACTACTTCCAAAGTTGCGGGTACAGTTGGTTACATTGCACCAGAGTATCACCAGATTCTTAAATTCACTGATAAGTGTGACATTTTCAGCTTTGGGGTGGTGCTTGGAGTTTTAGTGACCGGAAAACTTCCCTCTGATGACTTCTTCCAACACACGGATGAGATGAGTATAGTGAAATGGATGAGGAAGGTTATCATCTCGGAGAATCCAAAGGAAGCCATTGATGAGAAGCTTCGTGGGAATGGTTTTGAGGAGCAAATGCTTCTTGTTCTTAAGATTGCATGCTTTTGCACTATGGATGATCCTAAGGAGAGACCTAATAGCAAGGATGTTAGGTGTATGTTAACTCAAATCAAGCATTGA 1914 0.476 MASQNPIFFFLFLLLFFFSSSIIKAKLDLHPSDLTAFRTLQRDLGLNALLVNGQRFHPCTIEGVFCERRLSTNDTATATYVLRITRLLFTSKNLNGTLSSAIGHLTELKELSLSDNHLVDRIPNSIVNLKKLEILDLRGNGFSGEVPPRLSSLARLRVLDVSSNKLSGNLNFLKYFPNLEKLNVADNLFVGRVPVSVRSFRNLRHFNFSGNSFLEGSTPIVPRRFIFAEDDGESNDGITALAPSPRSNKRRRRSYFPSASSPAPGPAPHHHHHNNHRRKILGWILGFLAGAFAGIISGFIFSLLYKLTKALLKRGGKGAGPDIFSPLIKKAEDLAFLEKEDGLANLELIGKGGSGEVYKAELPGSDGKMIAIKKIIQPPKDASEMAEEESRDLHKKMRQIRSEINTVGHIRHRNLLPLLAHVSRPDSHLLIYEYMKNGSLQDLLHRIQEGNQELDWLSRHKIAIGVASGLEYLHMSHSPRIIHRDLKPGNILLDDDMEARISDFGLAKAMPDAQTHITTSKVAGTVGYIAPEYHQILKFTDKCDIFSFGVVLGVLVTGKLPSDDFFQHTDEMSIVKWMRKVIISENPKEAIDEKLRGNGFEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLTQIKH* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1933 637 Coils Coil 383 403 - -
Ahy3g1933 637 Gene3D Transferase(Phosphotransferase) domain 1 435 637 - -
Ahy3g1933 637 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 637 - -
Ahy3g1933 637 SUPERFAMILY Protein kinase-like (PK-like) 339 633 IPR011009 -
Ahy3g1933 637 CDD STKc_IRAK 349 635 - -
Ahy3g1933 637 SUPERFAMILY L domain-like 56 215 - -
Ahy3g1933 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Ahy3g1933 637 Pfam Leucine Rich Repeat 108 129 IPR001611 GO:0005515
Ahy3g1933 637 MobiDBLite consensus disorder prediction 236 274 - -
Ahy3g1933 637 ProSitePatterns Protein kinases ATP-binding region signature. 349 374 IPR017441 GO:0005524
Ahy3g1933 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 11 637 - -
Ahy3g1933 637 ProSiteProfiles Protein kinase domain profile. 343 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1933 637 Gene3D Phosphorylase Kinase; domain 1 332 434 - -
Ahy3g1933 637 Gene3D Ribonuclease Inhibitor 47 220 IPR032675 -
Ahy3g1933 637 Pfam Protein kinase domain 345 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1933 637 SMART serkin_6 343 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1933 Ahy-Chr3 42815078 42817216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1933 12 637 Receptor kinase-like Gene Family AT2G31880 61.648 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Ahy3g1933 Pkinase 6.60E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1933 - - aip:107629358 1150.58