Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1927 ATGGATACGTTTATGACTACCACCCGGGTGTTACCAGAACCCGACCTTTACCTATACACTTCAGTCTCAACACCCATTCCAGTTCATGCCAGCATCTTGGCTTCGGCATCACCGGTTTTAGAGAACATCATAATGTCCAACAAAATCATCAAAATCTCCGGCGTTCCGCACCGAGCTGTCATTGCCTTCCTACGCTTCCTCTATTCCTTCAGGTGCAGGAAGGAGGAGATGGAGAAGTACGGAATGCACCTTCTAGCGCTATCGCACGTGTACGCGGTGCCGGAGCTGAAGAAAAGGTGCGTGAAAGCAGTGGGGGAGCACGTGACAGAGGAGAGCGTGGTAGACGTGTTGCAACTGTCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGCGTGAAGTTGGTGGATGATCGGTTCAAGAAGGTGGAGAGAACTGAGGGATGGAGATTCTTACAGAACCATGACCCTGCTCTCGAGCTAGATATCCTCTGTATTCTTGACGACAACGATAACAGGAAGAAGAGATTGATGATGAGGAAGAGACAAGAGAAGGTGTACTTGCAACTGAGTAAAGCAATGGAGTGTTTGGAACACATTTGTACGGAAGGGTGCACCAATGTGGGGCCCTACGATGTGGAACTTCGAAAGGGGAGAGAACCATGCACCAAGTTTGGTGACACGTGTCAGGGGATGCAAGCTTTGATACAACACTTTGCCACGTGTACGAACGGGAATAGTGGAGGCTGCATGAGGTGCAAGCGCATGTGGCAGCTCTTTAGGCTTCACTCCTCCATTTGCCATCGCCATGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTGAATTGAAGAGGCAAGAAGAGAAGAGAAAAGATGATGGAAGATGGAGACTACTTGTGAGGAAGGTGGCTTCAGCCAAAGCCATGTCATCTTTGTCACTCTCAAACACCAAGTGTGGGTTCAACAAATTCTAG 975 0.4933 MDTFMTTTRVLPEPDLYLYTSVSTPIPVHASILASASPVLENIIMSNKIIKISGVPHRAVIAFLRFLYSFRCRKEEMEKYGMHLLALSHVYAVPELKKRCVKAVGEHVTEESVVDVLQLSRLCDAPDLYLKCVKLVDDRFKKVERTEGWRFLQNHDPALELDILCILDDNDNRKKRLMMRKRQEKVYLQLSKAMECLEHICTEGCTNVGPYDVELRKGREPCTKFGDTCQGMQALIQHFATCTNGNSGGCMRCKRMWQLFRLHSSICHRHDSCKVPLCRQIELKRQEEKRKDDGRWRLLVRKVASAKAMSSLSLSNTKCGFNKF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1927 324 Pfam BTB/POZ domain 15 104 IPR000210 GO:0005515
Ahy3g1927 324 ProSiteProfiles BTB domain profile. 14 76 IPR000210 GO:0005515
Ahy3g1927 324 SUPERFAMILY POZ domain 25 103 IPR011333 -
Ahy3g1927 324 Pfam TAZ zinc finger 191 278 IPR000197 -
Ahy3g1927 324 SMART BTB_4 14 108 IPR000210 GO:0005515
Ahy3g1927 324 Gene3D - 108 181 - -
Ahy3g1927 324 Gene3D Potassium Channel Kv1.1; Chain A 14 106 IPR011333 -
Ahy3g1927 324 Gene3D TAZ domain 182 307 IPR035898 -
Ahy3g1927 324 SUPERFAMILY TAZ domain 183 281 IPR035898 -
Ahy3g1927 324 CDD BACK 109 152 - -
Ahy3g1927 324 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 6 318 - -
Ahy3g1927 324 SMART TAZ_2 184 279 IPR000197 -
Ahy3g1927 324 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 318 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1927 Ahy-Chr3 42767899 42771659 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Ahy3g1927 BTB 7.40E-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1927 - - qsu:112013900 409.453