Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1921 ATGGCGGAAGCAAACGGCGACGTTTTCCAGTGGCTGAAGTCGATGCCGTTAGCGCCGGAGTACAGGCCGACACTAACGGAATTCCAAGATCCGATCGCCTACATTTTCAAGATCGAGAAGGAAGCTTCCAAGTACGGAATCTGCAAGATCATACCGCCGTTTCCACCGCCGCCGAGGAAGGTTGCAATTGCCAACTTCACTCGCTCGCTGACTAAGCCCGACGAGCCTAACTCAAAGCCTACATTCACCACTCGCCAGCAGCAGATCGGGTTCTGCCCCCGCCGGCCCAGGCCCGTTCAGAGGCCCGTGTGGCAAAGCGGTGAGAACTACACTTTTCAGGAATTCGAGGCTAAGGCCAAAGCATTCGAGAAGAGCTACCTCAAGAAGCATCATCTTCACCACCAAGGCCACCGGAAGGGAGGAGGAGGTGGTGGTGGTTCCGGTGGCCTAGGGCCTCTCGAGGTGGAGACGCTGTTCTGGAAGGCGACCGTTGACAAGCCGTTCTCGGTGGAGTATGCGAACGACATGCCGGGCTCGGCGTTCAGCCGGAAATGCAGGGAGGAGTGTGCGGCGGCGCTAGCGGAGTCGGCGTGGAATATGAGGGAGATTTCGAGGGCGAATGGTTCTTTGTTGAGGTTCATGAAGGAGGAGATACCTGGTGTTACTTCTCCTATGGTGTATTTGGCTATGTTGTTCAGCTGGTTCGCTTGGCATGTTGAGGACCATGACCTCCATAGCTTGAATTACCTTCACATGGGTTCTGGGAAGACCTGGTATGGCGTGCCGAGAGATGCAGCCGTTGCGTTCGAAGATGTTGTTAGGGTTCATGGATATGGCTCTGAGATTAATCCTCTTGTTACTTTTTCTACTCTTGGCGAGAAAAACACAGTGATGTCACCTGAAGTATTGATAAACGCAGGTGTTCCATGCTGCAGAATTCCTGAGAGTATCACTGCTGAACCACGGAGTTCTCGCCTTAAAGATAAGAAGAGGGGTGAAGGGGAAACTGTAATTAAAGAACTATTTGTCCAGGATGTGTCACAGAACAATGATCTGCTTCAAGAACTCAGCAAGGGATCTGAGATTATACTTCTACCTCGTAGCTCATTTGACATTTCTCTTTGCTCAAAATTACGATCTGGATCCAAACAACGGAAAGTGAACTCTCGATTTTCCCTTGGTGCATGCAACTCCGAGGAAATGAATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGCATTCAGCATGAACAGAGGAATCAAGCAAGAAGGTTCCCTTTCTATAAAAGACAAGATTACTTCATTGTGTGAAAGGAGCATGATTTCCTCATATGATGTAAATGGCAACATCTGCTCTTCAAGTTCCAAGCAACTTCAAGGTGACAATGAAAGAGAAAGTGGTGAAGGGGATGGTTCGCCAGATAAGAGACTTTTTTCATGTGTCACATGCGGAATATTGTGCTTTCCTTGTGTAGCTATTGTACAGCCTAGAGAATCTGCTGCTAGATATCTCATGTCAGCTGATTGTAGTTTCTTTAACGATTGGGTAGTTGGTTCTGGAGTGTCTAGCAAAAAGTTTATTGCCCATGAAGAAGCGGCTTTTCCTGAACCAAGTATGTATGCAGGGTGGACAGAAAAGAAGACCCAAGGATTGTATCAGGATCCTGTTCAATCTGCCCAGTATCAGCTACAGACTGCTGAGCGTAATTATGAGGAGTCCCTTGGAAAAAGCAATACAGCTCTTGCATTGTTGGCTTCAACATATGGAAATTCTTCCGACTCTGAGGAAGAGCATGGTGACTCAGATATTGTAGTTGATGGTCATGAATCACCTATGATTAATGCCACATTAGGAGGATCACCATCTAATTTTCAAGATGGCTGTACTATTCCCCTTACTGGACCTGATAGCAGAAATGATTTTAGTCATCAATCTTTTGACCACTCTTTAGAAAAACAGGATTGTGATACTTCTTCAGGGTTTGCATTAAAAAATATGAGGGCAATGTATACCAATGATACTGAAAAAACATTGTTGGGCAAGGCTATGGTTCCAAATGATGATAAAAATGCCTCAGTGATGCCACAAGGTGATCAAGACTCATCTAGAATGCATGTCTTCTGTCTGGAGCATGCTGTAGAAGCAGAGCAGCAACTTCGCCCAATAGGTGGAGCCCACATAATGCTCCTATGTCATCCAGATTTCCCCAAGATAGAGGCTGAAGCTAAGCTTGTAGCAGAAGATCTTGGGATTGATTACCTGTGGAAGAAGATTGAGTACAGGCATTCCAGCAAGGAGGATGAGGAGAGGATCCAGGTAGCCCTGGATAGTGAGGAAGCTATTCCTGGGAATGGGGACTGGTGTGTGAAGCTGGGAATCAATCTTTTCTACAGTTCAACTCTTAGCCGTTCTCCTCTTTACAGTAAGCAGATGCCTTACAATTCTGTCATATATTATGCATTTGGCCAAAGCTCTCCAGCAAGTTCACCATTAGAACCAAAGGTCTATCAGAGAAGGGTTAACAAGCAGAAAAAGATAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAGTCAGGTACATCCTCTTTTGGCCAAAAGAGATTCTGAAGATGTTGAAGATGAGAAAAGCTTACATGGGTGGGGATTACATGATGAGAAAATAGAGAGATCAGGAAGCATCCCTAAAAGCGAAACTAGTGCCAGAAAATCAGGTAAGAAGCGGAAAATGACTATTGAGAATGGAAGAGCCAGGAAAGGCAGTTTTGCTGAGAGAGATGTGGATTTGGATAATCCAACTGAAGACAAACCTAACCAACAGCTGAGGAGGACTCTTAGAAGTAAGCAAGCCAGGGATATTGAGAGTGAAGGTGCGGATTTGGAAGGGGATTATTCTCCCCCATATCATAGAAAACCTTTAAGTGACCAAACAAATTGCACAGGAAGTGATGCAGTTTCTGATGATTCACTTGATGATAAATTTATTGACAATGATGTGGTTTCAGATGATACAATGGTCTATGATTCTGATTGCCATCAGAGATTTGAACATAGCAGCATGCAAGTTGAAGACATAGAAGATGCAGTTTCTGAGGATTCATTGGATGACGGTTCTCTTCAGCTTCATAGGAAGAATTCTAAAAGCAAGCATGCCAGATACATTAGAAAAGGCAGATGCATTGCTGAGAAAGAGGAAATGATGTCTGATGACCAATTGGAGCCACACAAGAAGAACAAGCAACAGAGGAATCCTAAAAGCAGGCAAGCGAAATACCTTGCAAGAGAAGATGCTATATCACATGGTCAATTGGAAGGACATTGTCGCAAGTATAGAAAGACTCCTAAAGGTAGGCTGGCCAAATATGTAGCAGGGGAAGATGTATCATCTGATGAGCAATTGGAGAATTACAGTCGGAAGCAGCAAACAAGTCTTCCTAAAAGGCAGACAAACAAAGGTGTATTGACTGATGACCAATTGGAGGACCATTTTCAGAAGCAGCAAAAGAGTGTTTCTAGGCGAAGGCAAAACAAAGGCATTGAAAGAGGGGTTAAAGACGAAATGTCTGATGACCAATTAGAGGATCACGTTCAGAAGCAGCAAACTAGTGTTTCTAAGAGAAGGCGAAACAAACAAATTGAAAGAGATGATGTAATGTCTGATGATGAAATGGAGGATCATTTTCAGAAGCAGCGGAGTAGTATTCCTAGAAATAGGCAAAACAGTAATTCTCATCTGGCCCATAAAACTCCTAAACGAAAGCAAGCGAAATGCGTTGATGATGATGATGGTGATGATGATGATGTAAATTCTGACGATGAAGTGGAAGATGATTCTCAGCAGAAGCAGCAGAGAACTCTTAGAAGTAAGCAATCAAAACCAATGACACTCAAGCAGATGAAGCAAGCTCGCTCTCTCCAAATGAAAAATCAGACATCCCGGTCTGTAAAACGAGGTGCTCAGACACTTAAGAAATTAAAGGCATCTCAGATTCGGAATAAGCAATCTGGTAAATCCAGAGAGTTTAGTTTGAAAATGGAAGAGGGGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGCCCCAAAAGTCGAGGAGTCTGATGGAATATCAAAAGAAAAGCAAACCAAAAAGAAAAGGGTGAAGAATGCTACATCTGCAAAGGCAGCTAGCAATGCTAAAGTGAAGGATGAGGAAAATGAATTCCAGTGTGACATTGATGGCTGCACCATGAGTTTTGGGTCAAAACAGGAGCTGATGCATCACAAGAGAAATATATGTCCTGTAAAAGGTTGCGGGAAGAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGACGAGTTCACGAGGATGACCGCCCATTGAAGTGCCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACAGAACATATTCGAGTCCACACTGGTGCGCGACCGTATGTATGTGCCGAGCCAGGCTGTGGGCAAACATTCAGATTTGTGTCTGATTTCAGTCGCCATAAGCGTAAGACTGGGCACTCAACAAAGAAGAGTCGTTAA 4557 0.4463 MAEANGDVFQWLKSMPLAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPRKVAIANFTRSLTKPDEPNSKPTFTTRQQQIGFCPRRPRPVQRPVWQSGENYTFQEFEAKAKAFEKSYLKKHHLHHQGHRKGGGGGGGSGGLGPLEVETLFWKATVDKPFSVEYANDMPGSAFSRKCREECAAALAESAWNMREISRANGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEDVVRVHGYGSEINPLVTFSTLGEKNTVMSPEVLINAGVPCCRIPESITAEPRSSRLKDKKRGEGETVIKELFVQDVSQNNDLLQELSKGSEIILLPRSSFDISLCSKLRSGSKQRKVNSRFSLGACNSEEMNSSKGFVSDDLAFSMNRGIKQEGSLSIKDKITSLCERSMISSYDVNGNICSSSSKQLQGDNERESGEGDGSPDKRLFSCVTCGILCFPCVAIVQPRESAARYLMSADCSFFNDWVVGSGVSSKKFIAHEEAAFPEPSMYAGWTEKKTQGLYQDPVQSAQYQLQTAERNYEESLGKSNTALALLASTYGNSSDSEEEHGDSDIVVDGHESPMINATLGGSPSNFQDGCTIPLTGPDSRNDFSHQSFDHSLEKQDCDTSSGFALKNMRAMYTNDTEKTLLGKAMVPNDDKNASVMPQGDQDSSRMHVFCLEHAVEAEQQLRPIGGAHIMLLCHPDFPKIEAEAKLVAEDLGIDYLWKKIEYRHSSKEDEERIQVALDSEEAIPGNGDWCVKLGINLFYSSTLSRSPLYSKQMPYNSVIYYAFGQSSPASSPLEPKVYQRRVNKQKKIVAGKWCGKVWMSSQVHPLLAKRDSEDVEDEKSLHGWGLHDEKIERSGSIPKSETSARKSGKKRKMTIENGRARKGSFAERDVDLDNPTEDKPNQQLRRTLRSKQARDIESEGADLEGDYSPPYHRKPLSDQTNCTGSDAVSDDSLDDKFIDNDVVSDDTMVYDSDCHQRFEHSSMQVEDIEDAVSEDSLDDGSLQLHRKNSKSKHARYIRKGRCIAEKEEMMSDDQLEPHKKNKQQRNPKSRQAKYLAREDAISHGQLEGHCRKYRKTPKGRLAKYVAGEDVSSDEQLENYSRKQQTSLPKRQTNKGVLTDDQLEDHFQKQQKSVSRRRQNKGIERGVKDEMSDDQLEDHVQKQQTSVSKRRRNKQIERDDVMSDDEMEDHFQKQRSSIPRNRQNSNSHLAHKTPKRKQAKCVDDDDGDDDDVNSDDEVEDDSQQKQQRTLRSKQSKPMTLKQMKQARSLQMKNQTSRSVKRGAQTLKKLKASQIRNKQSGKSREFSLKMEEGEEGGPSTRLRKRAPKVEESDGISKEKQTKKKRVKNATSAKAASNAKVKDEENEFQCDIDGCTMSFGSKQELMHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR* 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 884 991 - -
Ahy3g1921 1518 SMART c2h2final6 1426 1450 IPR013087 -
Ahy3g1921 1518 SMART c2h2final6 1456 1480 IPR013087 -
Ahy3g1921 1518 SMART c2h2final6 1486 1512 IPR013087 -
Ahy3g1921 1518 SMART c2h2final6 1403 1425 IPR013087 -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1285 1319 - -
Ahy3g1921 1518 PANTHER LYSINE-SPECIFIC DEMETHYLASE 5 312 - -
Ahy3g1921 1518 Pfam jmjN domain 19 52 IPR003349 -
Ahy3g1921 1518 ProSiteProfiles Zinc finger C2H2 type domain profile. 1456 1485 IPR013087 -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1135 1153 - -
Ahy3g1921 1518 ProSiteProfiles Zinc finger C2H2 type domain profile. 1486 1517 IPR013087 -
Ahy3g1921 1518 Coils Coil 1382 1402 - -
Ahy3g1921 1518 ProSitePatterns Zinc finger C2H2 type domain signature. 1488 1512 IPR013087 -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 972 986 - -
Ahy3g1921 1518 SMART JmjN_1 17 58 IPR003349 -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1064 1395 - -
Ahy3g1921 1518 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 312 1080 - -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1064 1080 - -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1338 1376 - -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 901 969 - -
Ahy3g1921 1518 ProSitePatterns Zinc finger C2H2 type domain signature. 1428 1450 IPR013087 -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1089 1110 - -
Ahy3g1921 1518 ProSiteProfiles JmjN domain profile. 18 59 IPR003349 -
Ahy3g1921 1518 PANTHER LYSINE-SPECIFIC DEMETHYLASE 312 1080 - -
Ahy3g1921 1518 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 5 312 - -
Ahy3g1921 1518 SUPERFAMILY beta-beta-alpha zinc fingers 1426 1462 IPR036236 -
Ahy3g1921 1518 ProSitePatterns Zinc finger C2H2 type domain signature. 1458 1480 IPR013087 -
Ahy3g1921 1518 Gene3D Cupin 2 316 - -
Ahy3g1921 1518 ProSiteProfiles JmjC domain profile. 192 336 IPR003347 -
Ahy3g1921 1518 SUPERFAMILY beta-beta-alpha zinc fingers 1466 1510 IPR036236 -
Ahy3g1921 1518 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1207 1509 - -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1261 1275 - -
Ahy3g1921 1518 MobiDBLite consensus disorder prediction 1154 1233 - -
Ahy3g1921 1518 Pfam JmjC domain, hydroxylase 225 313 IPR003347 -
Ahy3g1921 1518 Gene3D Classic Zinc Finger 1424 1510 - -
Ahy3g1921 1518 ProSiteProfiles Zinc finger C2H2 type domain profile. 1426 1455 IPR013087 -
Ahy3g1921 1518 SUPERFAMILY Clavaminate synthase-like 103 279 - -
Ahy3g1921 1518 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1207 1509 - -
Ahy3g1921 1518 SMART cupin_9 192 335 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1921 Ahy-Chr3 42696373 42705428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1921 312 966 C2H2 Transcription Factor Family AT3G48430 42.136 2.54e-138 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy3g1921 JmjC 3.00E-19 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1921 - - adu:107478986 2330.06