Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1916 ATGAATAAAGCGATCGATTTTGCTTCAATTTTCTTACTCTTCACACTCTTTCCTCATCAATTTATTGTTCGTGTTTCTTCATCCAGTTCACCCATACATCCGAACCAGGGATATGCAGATGAAAGAATTCTCAAACCGGAACAAGAGCATGTCCATGAAGTGCATTGCTCTAGAGAAAGGAGCAGGGCAGCTAGGAAAGTAATAGAGGAGTATTTGACACCATTTTTGGAGCAAGAAAACTATCAGCTTTCAAGCAAGTGCAGACTTCACCCTGAAAATGACATGTTTAGGGATCAAGAAGAGCATAAAATTTGCCTAGGCTTTCATGACTGGAAGTGCGGATATTGTAAGAAAAGCTTCCGAGATGAGAAGTTTCTTGATCAGCATTTTGATAACAGACACTCCAATCTTCTCAATTTAAGTGATGGGAAGTGCTTGGCTGATTTATGTGGGGCATTGCATTGCGATGCTGTGATGAACAGGAAGTTCTCTAGAAGCAAGTGTAATCCAGCTGCTGCCACGAGGAATAAACACCTATGTGAGAGTCTTGCTGAGAGTTGTTTTCCTGTAAGTGATGGTCCATCTGCAAGTCGTCTTCATGAAATATTTTTACACCAATTTTGTGAGGCCCATACCTGCTCAGGGAAACAGAAACCCTTCTCTAGAGGAGGCAAGGTACAAAAAAGTATCTTCGTTGTGGTTTCTGGAGCATTGATCTTGGTGCTACTTCCTTTGTTCTATCTTTTCCTTTATCTGGTACAAAGAGATATGAAGAGTAGTACTCAAGAACTTCGCCGCATCTCAAAAATGGGACGGAAATCAAAGCCATCATGA 834 0.4113 MNKAIDFASIFLLFTLFPHQFIVRVSSSSSPIHPNQGYADERILKPEQEHVHEVHCSRERSRAARKVIEEYLTPFLEQENYQLSSKCRLHPENDMFRDQEEHKICLGFHDWKCGYCKKSFRDEKFLDQHFDNRHSNLLNLSDGKCLADLCGALHCDAVMNRKFSRSKCNPAAATRNKHLCESLAESCFPVSDGPSASRLHEIFLHQFCEAHTCSGKQKPFSRGGKVQKSIFVVVSGALILVLLPLFYLFLYLVQRDMKSSTQELRRISKMGRKSKPS* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1916 277 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 25 277 - -
Ahy3g1916 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 136 IPR013087 -
Ahy3g1916 277 ProSitePatterns Zinc finger C2H2 type domain signature. 113 134 IPR013087 -
Ahy3g1916 277 PANTHER ZINC FINGER PROTEIN-RELATED 25 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1916 Ahy-Chr3 42611245 42614155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1916 35 277 C2H2 Transcription Factor Family AT5G63280 60.081 1.18e-102 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy3g1916 None None None