Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1883 ATGGATTTCGACCTTTACTCAAGCGATAATGATGAAGAGTCATCTGAGATGTCGTTGGGTGTATGTGGTTCTTCAGGGTCCTCTGATGATGATGATAGTACTAGCTTATTTGGCATGGGAACCATTTTCACTTCTGAGGAGGAGGCTTACAATGCTTACAAGGGGTTTGCCTGGACAAGGGGTTTTGGTGTTTGCAAGGGGGATGTGGGACGGGTTGATGGTGTTTTGGTGAGGCGGGACATCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATCGGCCAGAACGAGTAAGGGAGGAGCGGCTAGAGAGTCGCACGAACTGCAAAGCAAAATTAAAAATATACTATGATGTCCATGATAATGTGTGGAGAGTGCGAAAGATTATTGATGAACACAACCACAACATGGCCCCGACCGCAGTTTGCAACCTGTTGCCAAGTCACCGAAAAATGAGCGACGGGGATAAGGCTCAAGTGAATAGCATGAAGCAATTCAAAATCCCTACCCCGAAGATAATGGCTTACATGGCAGGCCAATCGGGTGGCTACAACATGCTTCGATTTACAAAAAGGGATTTGTACAACTATGATGAGGAGGTCCGCACTTACAGATGGGTTCTGCTAAACCTTTTGGATGTTATGGGTCAAAGAACACCGAACCTTGTTGTGACGGATGGGAAAAAGGCAATGCGCGCTGCCATTGCGGAGGTGATGCCTTCAGCCATGCACAGACTATGTGCATGGCATCTGGAGAAAAATTGTGTCCAACGGGTAAAGGAAGCTAAATTTTGGAAAGTATTCAAGAAGGTTATCTATGCAAACTTTGATTTTGACGACTTGGATAGGGTCGTGAAAGATTATCAGAACAATGAGGTTACTGCACAATTTTACTCCATTTATTACACACCCGTGTTAAATACTGGATTAGATGCAATAGAGTTGTCTACGTCGAAGCTGTATACAAGAGCTGTTTTTAGGGAGGTTAAAAAGCAAATCAAGGGTGTCGCAACACTATTGTTTCAGGGAAGGGAGAGCATCAGCATGACCATCGTGTATAGCTTTAGTAAAATGGGTAGACCAGATCGTGTATTCAAGGTTTTGTATGATCCGAATGACCGTAAGATTGAGTGTGAGTGTAAGATGTCGGATAGTTATGTTATACCGTGTTCCCATATATTTTGTGTCATGAAGTACGAGGGTATGGAGGAAATTCCTGAAACACTTGTCCTTAGGCGCTGGTGTAAGATTGCAAAAGATTGTACAACGTTGAAAATGGAGAATGATTCAAGGGAACAGGCAAGACTGCTTCGATATAATGCACTATACTCAACTTTATCCCATGTTGTTACACTTGGTTGCAAAGAGGTTGAAGATTTTGCGCTTGCACAGGATGCTATATCAAACCTGGTTGATATATTGCAACAGCGCTGTGTGAAAAAGGATGGTAACAAGGTTTTGCCCAACAACTGTGCGGTCAAAGACCCTACGATGGCAGCTACAAAGGGTGCACCAAAGCGAGAAAAAACCAATTTATGTGCCTCAGAGGAGGAGCCTAAACCAAAGAGGCATTGTTGCACTAAGTGTGGGGTCCCCGGACATACAAGAAGATTATGTGCAAGCCACGATGCGAAGGCTATACCAACGGGATCAAAAGCACCATCATCAGCTTTCGCTGAGTCTTCATTCGCCAATGAACCGAAGGTCACATCTAGCGTAGCCAACAAGGTGCATCATTAG 1746 0.4439 MDFDLYSSDNDEESSEMSLGVCGSSGSSDDDDSTSLFGMGTIFTSEEEAYNAYKGFAWTRGFGVCKGDVGRVDGVLVRRDIFCHRQGTRSDKHYDRPERVREERLESRTNCKAKLKIYYDVHDNVWRVRKIIDEHNHNMAPTAVCNLLPSHRKMSDGDKAQVNSMKQFKIPTPKIMAYMAGQSGGYNMLRFTKRDLYNYDEEVRTYRWVLLNLLDVMGQRTPNLVVTDGKKAMRAAIAEVMPSAMHRLCAWHLEKNCVQRVKEAKFWKVFKKVIYANFDFDDLDRVVKDYQNNEVTAQFYSIYYTPVLNTGLDAIELSTSKLYTRAVFREVKKQIKGVATLLFQGRESISMTIVYSFSKMGRPDRVFKVLYDPNDRKIECECKMSDSYVIPCSHIFCVMKYEGMEEIPETLVLRRWCKIAKDCTTLKMENDSREQARLLRYNALYSTLSHVVTLGCKEVEDFALAQDAISNLVDILQQRCVKKDGNKVLPNNCAVKDPTMAATKGAPKREKTNLCASEEEPKPKRHCCTKCGVPGHTRRLCASHDAKAIPTGSKAPSSAFAESSFANEPKVTSSVANKVHH* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1883 581 MobiDBLite consensus disorder prediction 12 33 - -
Ahy3g1883 581 ProSiteProfiles Zinc finger SWIM-type profile. 367 403 IPR007527 GO:0008270
Ahy3g1883 581 PANTHER OS02G0262500 PROTEIN 41 190 - -
Ahy3g1883 581 MobiDBLite consensus disorder prediction 556 581 - -
Ahy3g1883 581 MobiDBLite consensus disorder prediction 550 581 - -
Ahy3g1883 581 Pfam MULE transposase domain 201 256 IPR018289 -
Ahy3g1883 581 PANTHER OS02G0262500 PROTEIN 314 496 - -
Ahy3g1883 581 PANTHER OS02G0262500 PROTEIN 200 292 - -
Ahy3g1883 581 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 190 IPR031052 GO:0006355
Ahy3g1883 581 MobiDBLite consensus disorder prediction 1 33 - -
Ahy3g1883 581 Pfam FAR1 DNA-binding domain 53 140 IPR004330 -
Ahy3g1883 581 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 314 496 IPR031052 GO:0006355
Ahy3g1883 581 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 292 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1883 Ahy-Chr3 41541966 41544549 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1883 FAR1 4.20E-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1883 - - ahf:112776551 1145.95