Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1877 ATGAAGCCGGTTGACTCCTTCAGAATGGCAGAATCGCAAGATGAACATGTTTCAAGCGAGGATCCTCCTTTATGCACTTCACCTAGCCGAAATTCATTAATGGAGGTCGATATAGTGGAACCGCTAGATTGTGTAGCCTCTGACGTTTCAGAAAATTTATCATACGAACAAGAAAACCTAACCGGCGATGTCACAGGCCATGGTCACAAGTCGAACAATGCCACACAGTTGTCGGATGTTACAGATGTTGGAAGTGAAGAGATGGAGCTTGTTGATGAGTTACCAGATCATGATTGCCTACAAGAAGACGAGATACCAAGAGTTGGAATGTGGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAAGCTATACACTGTAATCGCGACGGGATCCGCGAGTCTTGTGTTAAAGCACCAACGCGGAAGAATGCGATTTCAGCTGCTGGGTGCAAGGTAAAGATATATATAAAATTTGATAAAGACGTGCAAGATTGGATTTTGCTCAAGGTTGACTTGACGCACTCTCATCCCTGTTCACCGAAAGAGGCAGTGCACTACCATGAGTATAGGCAGCTGATCATGCATGTGAAGTGCGTGATCGAGGATAATGATGAGGCTGGGATTCGGCCAAACAAGACATTCCTTGCTTTGTCAAATGAGGCTGGTGGCCCCTCTAACTTAGGATTCTCAGAGAAGGATTTAAGAAATTATATAATAGCAAGGCTCCGAACTAGCAACGTGAATGCGGATTTCAGGGAGATGATGAGCTACTTCAGGAGAATGAAGGACATCAATCCAAACTATTTTTACGCGGTGGAGTTGGACGATGAGTGTAAATTTAAGAGTGCAGTATGGGTCAATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAATTGATAGCACTTACAGAAGGAATAGGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAACCACCATGGTAGGTTGACCCTCCTCGGTTGTGCTTTGTTGGGGAATGAGAAAATCGCAAGTTATGAGTGGGTTTTTAGCCAATGGGTCAACTGCATGGGAACTGCTCCACAGTGTATCATAACCGATCAATGTCGATCCATGTACCGTGCGATAAAAAATACTTTACCCGACACACGCCACAGGTGGTGCATCTGGCATATTATGAATAAGTTACCTTCCAAGCTTGGGGGTTACCGTCAGTATGGAGCATTGTATGTTGACCTAAATGACATTGTGTGGAACTCTCGGACCGAGGAGTCATTTGAAGATAACTGGGCTGATTTTATAGATGAGTACAACTTACATAACAACACATGGCTATCAAATCTGTATGATGATCGACATATGTGGATCCCAATATACTTCAAGGGTGAATTTTGA 1473 0.4379 MKPVDSFRMAESQDEHVSSEDPPLCTSPSRNSLMEVDIVEPLDCVASDVSENLSYEQENLTGDVTGHGHKSNNATQLSDVTDVGSEEMELVDELPDHDCLQEDEIPRVGMWFAQLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESCVKAPTRKNAISAAGCKVKIYIKFDKDVQDWILLKVDLTHSHPCSPKEAVHYHEYRQLIMHVKCVIEDNDEAGIRPNKTFLALSNEAGGPSNLGFSEKDLRNYIIARLRTSNVNADFREMMSYFRRMKDINPNYFYAVELDDECKFKSAVWVNARCRASYEYYGDVVSIDSTYRRNRHGLPFVSFVGVNHHGRLTLLGCALLGNEKIASYEWVFSQWVNCMGTAPQCIITDQCRSMYRAIKNTLPDTRHRWCIWHIMNKLPSKLGGYRQYGALYVDLNDIVWNSRTEESFEDNWADFIDEYNLHNNTWLSNLYDDRHMWIPIYFKGEF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1877 490 MobiDBLite consensus disorder prediction 1 30 - -
Ahy3g1877 490 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 490 IPR031052 GO:0006355
Ahy3g1877 490 Pfam FAR1 DNA-binding domain 120 207 IPR004330 -
Ahy3g1877 490 PANTHER OS03G0843700 PROTEIN 83 490 - -
Ahy3g1877 490 Pfam MULE transposase domain 328 421 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1877 Ahy-Chr3 40914956 40917969 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1877 MULE 3.20E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1877 - - ahf:112733025 908.672