Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1865 ATGCCCCGTGGAGTACTAGAAGTGGATCCACCACCTCCAGCATCTAATGGAGAGCCATCACCTAAGAAAACTGATACAACTTTGTTCTTCCTTGGAGGGATAGTGATGTTCATCATATTGTTGATAGTTTTGGTTGTATTTTGGAAGCGTATCAAAGGGACCAAAAATACAACACCTCCTAAAACTACTAAAGGCAAACAAGGGAAGCTTACTGAAACAGCAGAAGTTATGGATATGATGTTTTCATCTAAACAACAGCAAGGATCCATGGAGTTGTTGAGTGGGAACCTTAGGACAATTAGTTACTTTGACTACCAGATATTAAGAAGAGCAACCAAGAATTTTTCTCCTACTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGATGGATGGAAAACTAATTGCTCTTAAGAAACTATCTTTGAATAAATCCCAGCAGGGAGAAAGAGAGTTTCTGGCAGAGGTGAGGTTGATCACAAGTATCCAACACAAAAATCTTGTTCGCCTTCTTGGATGTTGCATGGATGGACCACAAAGGATTCTTGTCTATGAATACATGAAGAACAGAAGTTTGGACCTCTTCATATATGGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGATAACTTTCATTCCAAGATTGGAGACTTTGGCCTTGCCAGATTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTGGGTTATACAGCACCTGAATACGCTTTAAGAGGAGAATTATCAGAAAAGGCGGATATCTATAGTTTTGGAGTTCTGTTGCTCGAAATTATTTGTTGTAGAAAAAACACAGATCTCACTTTGTCATTGGAAATGCAGTACCTCCCGGAATATGCATGGAAACTTTACGAGAACTCAAAGATTATGGAGCTTGTAGATCCAAAGCTGAAAGAAGAGGGGTTCGTGGAGAAAGATGTTATGCAAGCATTCCACGTGGCATTCCTCTGCCTTCAGCCTCTTGCAAATCTAAGACCTCCGATGTCAGAGATCGTGGCACTCTTGACATTCAAAATTGACATGGTCACAACACCAATGAGGCCTGCGTTTCTTGATCGAAGGCGCAAAACTGATTTTCAAACCCCTTCCCCAGAAGTAATATCCATGCTTTCACATCTCCCATGA 1281 0.4145 MPRGVLEVDPPPPASNGEPSPKKTDTTLFFLGGIVMFIILLIVLVVFWKRIKGTKNTTPPKTTKGKQGKLTETAEVMDMMFSSKQQQGSMELLSGNLRTISYFDYQILRRATKNFSPTNLLGSGGFGPVYRGKLMDGKLIALKKLSLNKSQQGEREFLAEVRLITSIQHKNLVRLLGCCMDGPQRILVYEYMKNRSLDLFIYGNNADRFLNWSTRFQIVLGVARGLQYLHEDSHLRIVHRDIKASNILLDDNFHSKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYALRGELSEKADIYSFGVLLLEIICCRKNTDLTLSLEMQYLPEYAWKLYENSKIMELVDPKLKEEGFVEKDVMQAFHVAFLCLQPLANLRPPMSEIVALLTFKIDMVTTPMRPAFLDRRRKTDFQTPSPEVISMLSHLP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1865 426 PANTHER RECEPTOR-LIKE KINASE 94 405 - -
Ahy3g1865 426 MobiDBLite consensus disorder prediction 1 22 - -
Ahy3g1865 426 Pfam Protein tyrosine and serine/threonine kinase 119 386 IPR001245 GO:0004672|GO:0006468
Ahy3g1865 426 CDD STKc_IRAK 121 388 - -
Ahy3g1865 426 ProSiteProfiles Protein kinase domain profile. 115 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1865 426 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 405 - -
Ahy3g1865 426 MobiDBLite consensus disorder prediction 1 18 - -
Ahy3g1865 426 SUPERFAMILY Protein kinase-like (PK-like) 94 390 IPR011009 -
Ahy3g1865 426 Gene3D Phosphorylase Kinase; domain 1 74 191 - -
Ahy3g1865 426 SMART serkin_6 115 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1865 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Ahy3g1865 426 Gene3D Transferase(Phosphotransferase) domain 1 192 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1865 Ahy-Chr3 39705979 39709570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1865 84 391 Receptor kinase-like Gene Family AT1G53430 49.515 7.88e-97 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy3g1865 PK_Tyr_Ser-Thr 3.10E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1865 - - adu:107478947 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2173 13 41681752 41685021 Ahy3g1865 3 39705979 39709570 hybridization
Ahy11g3100 11 148636447 148639346 Ahy3g1865 3 39705979 39709570 PCT
Ahy1g1871 1 95269589 95272422 Ahy3g1865 3 39705979 39709570 PCT
Ahy3g1865 3 39705979 39709570 Ahy11g3100 11 148636447 148639346 PCT
Ahy3g1865 3 39705979 39709570 Ahy1g1871 1 95269589 95272422 PCT