Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1847 ATGAGTTACGCGAATGGCTCGCCGCACCGGCCGCCGCCTCCGGATACTGACTTGGAGGCGGGGCCTCCAACAGCACGCTCCGGCGACTTCGACGACGGCGATGTCTCTGATCCGTTTGACATCACCAGGACTAAGAACGCCTCGATTGAGCGACTCAGACGTTGGAGGCAAGCAGCACTGGTGCTTAATGCTTCTCGTCGATTTCGTTACACCTTGGACTTGAAAAAACAAGAAGAGAAGACACAAATATTGAGAAAGATTAGAGCTCATGCACAAGCTATTAGGGCAGCATATCTTTTCAAAGCAGCCGGGGATGGTCAAGTGATTGAAACCACAAAGCCTCCTGCGGCCTCTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAGTTTCAAGGGAGCATGATACCGTTGCTCTTCAGCAATATGGAGGGGTTGCTGGGATATCAAATTTGTTGAAAACCAATTTAGAGAAGGGGATTCATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAATGATTATCCTCGAAAGAAAGGAAGAAGTTTCTGGATGTTTATGTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATGGTAGCTGCAGCGGCTTCATTGGCATTGGGGATAAAATCTGAGGGTATTGAGGAAGGATGGTACGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTCACAGCTATAAGTGACTATAAGCAGTCTCTTCAGTTTCGGAACCTGAATGAAGAGAAGAGAAATATCCATTTGGAGGTTATCAGAGGTGGTAGAAGGATTGAAATCTCTATATATGAGATTGTTGGTGGTGATGTTATACCCCTCAATATTGGTAACCAGGTCCCTGCTGATGGAATTTTGATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTCCATAAAGATTCTAAGGACCCTTTTTTGATGTCTGGGTGTAAAGTTGCAGATGGCAGTGGTACTATGCTGGTAACTGGTGTTGGTGTTAATACTGAATGGGGGCTTCTAATGGCCAGCATTTCAGAAGACACTGGTGAAGAAACACCTTTGCAGGTTCGCTTAAATGGTGTAGCCACCTTCATCGGTATTGTTGGTCTCTCTGTTGCTGTTGTTGTTCTGATTGTGCTACTGGCCAGATTTTTCTCCGGCCATACCAGAGATGCAAGTGGCAATGTTCAATTTAAAGCAGGGAAGACTAAAGTTGGTGATGCTATTGACGGGGCAATTAAGATAGTAACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCAGAAGGGCTCCCGTTAGCAGTTACCTTAACACTGGCATACTCAATGAGGAAAATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCCGCTTGTGAGACAATGGGCTCTGCAACAACCATTTGCAGTGATAAGACTGGCACGTTGACCATGAATCAGATGACTGTGGTTGAGGCTTATGCTGGTGGGAAGAAGAATGATCCTCCTGGTAACAAGTCAGAGCTCTCTCCCAAGCTCCACTCTTTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTATGTCCCTGAGGGTGGTAACGATGTTGAGGTTTCCGGATCACCAACAGAAAAGGCAATTTTACATTGGGGATTAGAGATTGGGATGAACTTCGACTCTACTAGATCGGAATCATCAATTATTCACGTTTTCCCTTTCAATTCTGAGAAAAAACGAGGCGGAGTTGCAGTACAAACGGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTGCCGAGATTGTCCTAGCCTGCTGTACACGGTACATTGATGCAAATGACCAGTTGGTAGACATGGATGAGGAAAAGATGGTATTTTTCAGAAAAGCTATTGAAGACATGGCTGCCGAGAGTTTACGTTGTGTTGCCATTGCGTATAGAACATTTGAAAAGGAGAATGTTCCAGCCACTGAAGAAGAACGGGCTCACTGGTCTTTACCAGAAGATAATCTTGTTTTGTTAGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTAGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATCTGGGGTTAAGGTAAAAATGGTCACTGGTGACAATGTCAAAACTGCAAAAGCAATTGCTGTGGAATGTGGAATACTTAGTTCCCCTGCTGAAGCTACAGAGCCAATCATCATTGAAGGAAAAACTTTTCGTGCCATGACAGATGCACAGAGAGATGAAATAGCTGAAGCAATATCAGTTATGGGACGGTCATCTCCTAATGACAAATTATTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCTGATATTATTATTTTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTGAGATGGGGACGTTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTAGCTGCTCTTGTTATAAATGTTGTTGCTGCTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGCTTTTGTGGGTAAATCTTATCATGGATACTTTGGGAGCACTAGCATTGGCAACTGAACCACCAACTGATCACCTTATGGATCGGCCTCCAGTGGGCCGAAGAGAACCTCTCATAACAAATATTATGTGGAGAAATTTGCTGATACAGGCAATGTACCAAGTATCTGTGTTGCTTGTTCTGAATTTCCGAGGTAGGAGCATACTGGGTCTGACACACGACAAATATGATCATGCAATTAAAGTGAAAAACACACTGATCTTCAATGCATTTGTTCTGTCTCAAATCTTTAATGAGTTCAATGCACGAAAGCCAGATGAGTTTAACATATTCAGTGGAGTCACGAAAAACTACCTCTTCATGGGTATAGTGGGATTAACTGTTGTGCTTCAGATCATCATCATTGAATTCCTCGGCAAGTTCACTTCAACAGTCAGGCTTAATTGGAAGCAGTGGCTGATCTCTGTCATCATTGGGTTCATAAGTTGGCCTCTTGCTGTGGTTGGTAAATTGATACCAGTTCCAGATACTCCCATCAACAACGTATTTTCAAGATTTCGGGGTCGAAGAAAGGAACCTGAGGCCTCACAATAG 3249 0.4374 MSYANGSPHRPPPPDTDLEAGPPTARSGDFDDGDVSDPFDITRTKNASIERLRRWRQAALVLNASRRFRYTLDLKKQEEKTQILRKIRAHAQAIRAAYLFKAAGDGQVIETTKPPAASAGEFPIGQEQLASVSREHDTVALQQYGGVAGISNLLKTNLEKGIHGDDADLLKRRNAFGSNDYPRKKGRSFWMFMWDACKDLTLIILMVAAAASLALGIKSEGIEEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRNLNEEKRNIHLEVIRGGRRIEISIYEIVGGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGVNTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLIVLLARFFSGHTRDASGNVQFKAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKNDPPGNKSELSPKLHSLLIEGVAQNTNGSVYVPEGGNDVEVSGSPTEKAILHWGLEIGMNFDSTRSESSIIHVFPFNSEKKRGGVAVQTADSEVHIHWKGAAEIVLACCTRYIDANDQLVDMDEEKMVFFRKAIEDMAAESLRCVAIAYRTFEKENVPATEEERAHWSLPEDNLVLLAIVGLKDPCRPRVKDSVELCQKSGVKVKMVTGDNVKTAKAIAVECGILSSPAEATEPIIIEGKTFRAMTDAQRDEIAEAISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSILGLTHDKYDHAIKVKNTLIFNAFVLSQIFNEFNARKPDEFNIFSGVTKNYLFMGIVGLTVVLQIIIIEFLGKFTSTVRLNWKQWLISVIIGFISWPLAVVGKLIPVPDTPINNVFSRFRGRRKEPEASQ* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1847 1082 Pfam Cation transporter/ATPase, N-terminus 145 212 IPR004014 -
Ahy3g1847 1082 PANTHER CALCIUM-TRANSPORTING ATPASE 23 1073 - -
Ahy3g1847 1082 MobiDBLite consensus disorder prediction 1 42 - -
Ahy3g1847 1082 Pfam E1-E2 ATPase 265 465 - -
Ahy3g1847 1082 Pfam Ca2+-ATPase N terminal autoinhibitory domain 37 79 IPR024750 GO:0005516
Ahy3g1847 1082 CDD P-type_ATPase_Ca_PMCA-like 169 928 - -
Ahy3g1847 1082 Gene3D - 168 363 - -
Ahy3g1847 1082 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 134 1059 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy3g1847 1082 Pfam haloacid dehalogenase-like hydrolase 484 809 - -
Ahy3g1847 1082 SMART Cation_ATPase_N_a_2 143 217 IPR004014 -
Ahy3g1847 1082 PANTHER CATION TRANSPORTING ATPASE 23 1073 - -
Ahy3g1847 1082 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 692 IPR023299 GO:0000166
Ahy3g1847 1082 SUPERFAMILY HAD-like 485 900 IPR036412 -
Ahy3g1847 1082 Gene3D - 47 102 - -
Ahy3g1847 1082 Pfam Cation transporting ATPase, C-terminus 880 1057 IPR006068 -
Ahy3g1847 1082 Gene3D - 195 1048 - -
Ahy3g1847 1082 PRINTS P-type cation-transporting ATPase superfamily signature 311 325 - -
Ahy3g1847 1082 PRINTS P-type cation-transporting ATPase superfamily signature 819 831 - -
Ahy3g1847 1082 PRINTS P-type cation-transporting ATPase superfamily signature 795 814 - -
Ahy3g1847 1082 PRINTS P-type cation-transporting ATPase superfamily signature 487 501 - -
Ahy3g1847 1082 PRINTS P-type cation-transporting ATPase superfamily signature 688 699 - -
Ahy3g1847 1082 PRINTS P-type cation-transporting ATPase superfamily signature 710 720 - -
Ahy3g1847 1082 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 428 510 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy3g1847 1082 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 762 875 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy3g1847 1082 SFLD Haloacid Dehalogenase 469 847 - -
Ahy3g1847 1082 SFLD p-type atpase 469 847 IPR044492 -
Ahy3g1847 1082 Gene3D - 484 840 IPR023214 -
Ahy3g1847 1082 PRINTS Sodium/potassium-transporting ATPase signature 230 250 - -
Ahy3g1847 1082 PRINTS Sodium/potassium-transporting ATPase signature 480 501 - -
Ahy3g1847 1082 PRINTS Sodium/potassium-transporting ATPase signature 606 624 - -
Ahy3g1847 1082 Gene3D - 497 695 IPR023299 GO:0000166
Ahy3g1847 1082 SUPERFAMILY Calcium ATPase, transduction domain A 265 360 IPR008250 -
Ahy3g1847 1082 SUPERFAMILY Calcium ATPase, transmembrane domain M 144 1059 IPR023298 -
Ahy3g1847 1082 ProSitePatterns E1-E2 ATPases phosphorylation site. 489 495 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1847 Ahy-Chr3 38659029 38679932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1847 18 1076 Primary Pumps ATPases AT5G57110 74.438 0.0 1606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1847 K01537 - gmx:100792945 1813.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2143 13 40673272 40690058 Ahy3g1847 3 38659029 38679932 hybridization
Ahy11g3090 11 148557602 148571728 Ahy3g1847 3 38659029 38679932 PCT
Ahy1g1880 1 95358754 95372533 Ahy3g1847 3 38659029 38679932 PCT
Ahy3g1847 3 38659029 38679932 Ahy11g3090 11 148557602 148571728 PCT
Ahy3g1847 3 38659029 38679932 Ahy1g1880 1 95358754 95372533 PCT