Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1838 ATGAGAACTCAACGGCCTCACTGTCTCCTCTTCCTCTCCCTTCTCTGCTTGCTAGCCACATTCTCGAACCTCCACCGGACAGTCACCGCCGTTTACGATGCCGAATCTCCCGCTGCACCCGCAGCTGACGACGGCGATACAACCTTCATCCGAACCAGCTGCAACAACACGCTCTACCCGGACGTCTGCTACTCCTCCCTCTCTCGCTACGCCAATGCGGTCCAGCAGGATCCCGGCCAGCTCGCTCGCGTCGCTATCGCCGTCACACTCTCCAAGGTCCACCGCACTGCCTCCTACGTCTCCAACCTCACTCGCGACGCCGACTACACAGCCGATTCGCACGCAACCTCCGCGCTTCACGACTGTTTCACTAATCTCGGTGACGCCGTCGACGAAATTCGCGGTTCGCTGAAGCAGATGCGGCAAATTGGAGCCGCTGGAACCGGCGCCGGCTCGTTCCTGTTCCAGATGAGCAACGTACAGACGTGGATGAGCGCCGCACTCACCGACGAAGAGACTTGTACGGACGGATTCCAGGATGTGGCGGAGTGTCCGGTTAAGGCGGACGTGTGCGACCGCGTCACGAAGGTGAAGAAGTTCACGAGCAACGCTTTGGCTCTCGTCAATACCTACGCAAACAAGGGAGGACCGTGA 654 0.5963 MRTQRPHCLLFLSLLCLLATFSNLHRTVTAVYDAESPAAPAADDGDTTFIRTSCNNTLYPDVCYSSLSRYANAVQQDPGQLARVAIAVTLSKVHRTASYVSNLTRDADYTADSHATSALHDCFTNLGDAVDEIRGSLKQMRQIGAAGTGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVAECPVKADVCDRVTKVKKFTSNALALVNTYANKGGP* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1838 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 211 IPR035513 -
Ahy3g1838 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 211 IPR035513 -
Ahy3g1838 217 SMART PMEI_2 45 207 IPR006501 GO:0004857
Ahy3g1838 217 Pfam Plant invertase/pectin methylesterase inhibitor 49 207 IPR006501 GO:0004857
Ahy3g1838 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 214 - -
Ahy3g1838 217 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 10 214 - -
Ahy3g1838 217 TIGRFAM PME_inhib: pectinesterase inhibitor domain 37 211 IPR006501 GO:0004857
Ahy3g1838 217 CDD PMEI-like_3 52 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1838 Ahy-Chr3 38060723 38061707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1838 35 209 Carbohydrate Esterase AT1G53840 24.725 3.58e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1838 - - gmx:100812251 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2136 13 40029692 40030672 Ahy3g1838 3 38060723 38061707 hybridization