Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1836 ATGGACAAGCTCTTTTCATTGAACTGTTGCATTGGTTACATTCTTATTGTTTACTCTCTCTTTGCATGTGTGCATGGCAAAGAACAATTGTCATGCAATCAAACACCATACCCAAATGTTTGCAAGCATTACGTTGAGACGGCTACATATACATTATCGACCCAAGATGAACATGTTTCTTCACCTTCTTATTCGTTCCACGGCATGGCCCTTAAGGTCACCATGGACCAAGCCATTAGAGCCCATCAACTAGTCTCAACCATGGACCCTAAAAACTTCAAAGAAAACAAGAAAGCCAAGATGGCTTGGGAAGATTGTTTGGAGCTCTATGAGGACACTATTTATCAGCTGAACCGTTCAATGAAATCGAAAAACCTAAACGACAAGTTAACATGGCAAAGTGCTTCCATTGCAAACCACCAAACATGCCAAAACGGTTTCATTGAATTCAACTTGAATTCTCACCTAAACTTCTTTCCAACCATGCTGTCCAACTTCTCCAAATTGCTCAGCAACTCCTTGTCCATCACCAAGGCCGTGTCCATGTTAGAAGCGGAGCAAGAAGTGAGAGGAAGGAGGAGGTTATTGCTTTCATCATCATCAAATCATAACAAACACGGACATGGCGGCTTCCCTGAATGGCTATCGGTTTCCGATAGGAGGCTTCTTCAGGCGGCGACACCACCAAAGGGTGACGTGGTGGTGGCGCAAGACGGGAGCGGGAACTACAAGACGATAACGGAGGGAGTGGCGGCGGCGGCTAAGATTGGGGGAGGAAGGAGGGTTGTGGTGCACGTGAAAGCAGGAGTTTACAGAGAGAATGTTGATATCAAGAAGACAGTGAAGAACATAATGATAGTTGGAGATGGAATTGACGCTACCGTTGTCACTGCTGACGGTAACGCACAAGATGGATCCACCACTTTCCGTTCAGCTACTTTTGGGGTTTCCGGTGACGGGTTCATAGCGCGGGACATAACCTTTGAGAACACGGCGGGTCCACGGAAGCACCAGGCGGTGGCTCTCCGGTCCGGCTCCGACCACTCCGTCTTCTACCGCTGCAGCTTCAAGGGCTACCAAGACAGCTTATACGCCTACGCCCAGCGCCAATTCTACCGCGACTGCGACGTGTACGGCACCGTGGACTTCATCTTCGGCGACGCCGCCTGCGTCCTCCAGAACTGCAACATCTACGTCCGAAGACCCATGGGCAACCAGGACATCACCGTCACCGCCCAAGGTAGAACCGATCCCAACGAGAACACCGGCATCGTGATCCACAACTGCCGCATAACTGCTGCCGGCGACATGAGATCCGTTCAGGGCTCCTTCAAGACCTTCCTTGGGCGTCCATGGCAGAAGTACTCAAGAACCGTGATCATGAAGAGCGGCCTAGACGGCTTGATTAACCCGGCCGGTTGGAAACCATGGAGTGGAAGCTTTGCTCTCAGCACACTCTATTATGGTGAGTACATGAACACTGGTCCTGGTGCTAACACTGCTGGCAGGGTTCACTGGCCTGGCTTTCATGTTATTAGTAGTCCCTCTGAAGCTGTCAAGTTTTCTGTTGGTGATTTCTTGGCTGGTGGTTCATGGATTCCCGGCACTGGTGTCCCCTTTGATGCAGGTTTGTGA 1635 0.5015 MDKLFSLNCCIGYILIVYSLFACVHGKEQLSCNQTPYPNVCKHYVETATYTLSTQDEHVSSPSYSFHGMALKVTMDQAIRAHQLVSTMDPKNFKENKKAKMAWEDCLELYEDTIYQLNRSMKSKNLNDKLTWQSASIANHQTCQNGFIEFNLNSHLNFFPTMLSNFSKLLSNSLSITKAVSMLEAEQEVRGRRRLLLSSSSNHNKHGHGGFPEWLSVSDRRLLQAATPPKGDVVVAQDGSGNYKTITEGVAAAAKIGGGRRVVVHVKAGVYRENVDIKKTVKNIMIVGDGIDATVVTADGNAQDGSTTFRSATFGVSGDGFIARDITFENTAGPRKHQAVALRSGSDHSVFYRCSFKGYQDSLYAYAQRQFYRDCDVYGTVDFIFGDAACVLQNCNIYVRRPMGNQDITVTAQGRTDPNENTGIVIHNCRITAAGDMRSVQGSFKTFLGRPWQKYSRTVIMKSGLDGLINPAGWKPWSGSFALSTLYYGEYMNTGPGANTAGRVHWPGFHVISSPSEAVKFSVGDFLAGGSWIPGTGVPFDAGL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1836 544 Pfam Pectinesterase 232 529 IPR000070 GO:0030599|GO:0042545
Ahy3g1836 544 ProSitePatterns Pectinesterase signature 1. 258 277 IPR018040 -
Ahy3g1836 544 Gene3D - 228 544 IPR012334 -
Ahy3g1836 544 PANTHER PECTINESTERASE 23 543 - -
Ahy3g1836 544 SMART PMEI_2 25 176 IPR006501 GO:0004857
Ahy3g1836 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 180 IPR035513 -
Ahy3g1836 544 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 23 543 - -
Ahy3g1836 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 179 IPR035513 -
Ahy3g1836 544 Pfam Plant invertase/pectin methylesterase inhibitor 31 176 IPR006501 GO:0004857
Ahy3g1836 544 ProSitePatterns Pectinesterase signature 2. 377 386 IPR033131 -
Ahy3g1836 544 SUPERFAMILY Pectin lyase-like 226 543 IPR011050 -
Ahy3g1836 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 179 IPR006501 GO:0004857
Ahy3g1836 544 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Ahy3g1836 544 CDD PMEI-like_3 30 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1836 Ahy-Chr3 37986409 37989820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1836 10 544 Carbohydrate Esterase AT1G23200 50.624 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1836 - - lja:Lj4g3v3099630.1 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2133 13 39939485 39942015 Ahy3g1836 3 37986409 37989820 hybridization