Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1804 ATGAGATTAAGCTGCAACGGTTGCCGAGTGCTGCGAAAGGGATGCAGCGGGGAATGCCCGATCAGGCCATGCCTTCAGTGGATAAAGTCGCCGCAGTCGCAGGCCAACGCCACCCTCTTCCTGGCCAAATTCTACGGCCGAGCCGGCCTCATCAACCTCATCCATGCGGCCGCACCGCATCTACGACCAGCGGCGTTTAAGTCGCTGCTCCACGAAGCGTGCGGGAGGATCGTGGAGCCCATTCTTGGGTGCACGGGGTTGCTGTCGTCGGGGCGGTGGGACCTTTGCGAGGCGGCCGTGGAGGCCGTTTTGAGTGGGGCCCCAGTCGGGAAGGTGTCGTTGTGGTGCGAGTCTGCGGGTTCTTCGATGCTGAAGGCGTGCGATATAAGACACGTGGCGAATAAGGGAATGAAGAGTGGGTTGCACAAGGTGAAGGAGAGCACTAAGGGTTTCAAACGGAACGGAGGAGGAAAAGGGAAGAGAGGGAAGGAGATTGCTGACGTCAGCGACGACGACTGGGCTTCCGGACTGAGTGACCATAGAAGTTTAGTTAACGGTAACGGTGATAGCTGCTCCGTGGAAACCGAGACGGACACGGTGGAGGCTGCAGAAGCGTGTGACGGAGGCTTGGACCTCAACTTGACTTTGGGGTGTTTCTCGTCTTAA 666 0.5841 MRLSCNGCRVLRKGCSGECPIRPCLQWIKSPQSQANATLFLAKFYGRAGLINLIHAAAPHLRPAAFKSLLHEACGRIVEPILGCTGLLSSGRWDLCEAAVEAVLSGAPVGKVSLWCESAGSSMLKACDIRHVANKGMKSGLHKVKESTKGFKRNGGGKGKRGKEIADVSDDDWASGLSDHRSLVNGNGDSCSVETETDTVEAAEACDGGLDLNLTLGCFSS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1804 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 175 - -
Ahy3g1804 221 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Ahy3g1804 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 175 - -
Ahy3g1804 221 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1804 Ahy-Chr3 36710621 36711772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1804 1 216 AS2 family AT3G02550 46.552 4.92e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy3g1804 LOB 1.10E-21 No_clan