Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1784 ATGGGTCGTGGAAAAACAGAACTGAAGTGCCTCTCAACTGAGAAAGATCGGAAAGGCAGATTCAAGACAAGAATCAAGGGACTAGAGAGCAAAATGAAGAAATTTTCTGACAAATGCCAAGGATCCGAAGCATGCTTGATAGTTTATGAAGAAGGTAGCAACGCTGCACCAATGATTTGGCCAAAAGATTCTACAAAAGTCAGGTCCTTAATTAAAAAGTATGAATCTCAAAAGAATGTGAAGCCTCCTAAGATCTTTGATCTCCAAGACTTCTTTGAGCACAAGAAGACCTCGGTTGAAGGCGAAACTTTGAAAGCGCGAAAATGCATGTACAGCGTCAAGTATCCCACTTCTGACTTGAATATCAAGAGCTTTGATTTGGAACAACTGAGGATGTTCATTGGTATATTGGATAACAAGATTGGTGCGTGTGCTGAAAGGATTAACATGCTTAAAAATAGTCAAAAAGTTGAAAGTAACTTCAATTTTGGACACAATGTTGATCGGTACAACTCTCAGATTCAACCTATGATGCCACTTAGTTATGATACGGGTTCTAGTTCCCAAATGGGTCTCCTCAATCCAAATCCTATGGAATTGATGGGAAGTAATTATGGACTGGTGAATTGTGCTAATCAGTTTGAAGATTCTGTGTATAGTGTTATACAAAACGGTGCTTTAGTAAACTCAACAAAAGTGAAGGAGCCAGAGCCTATGGTTCATTATGACACAAATGTGATGGAGGACACTACTAGCAAGAAAGATGAAGTCCGTTTGGTTTGTACTGAGAAGACAATTGATAAAGTAAATTCCACAAATCAAGTTAGTGAGGCTTTGGATTGGGAAAGTCAATTTGCTGAGGCTGAGGCATGGGCTAGTGACTTTGGTGAGTTTGAGAATTGGATAAATCAACAAAGTGAGCATTCGGATTGGACAAACCTGACTGAATTTGTCTGTTGA 960 0.3917 MGRGKTELKCLSTEKDRKGRFKTRIKGLESKMKKFSDKCQGSEACLIVYEEGSNAAPMIWPKDSTKVRSLIKKYESQKNVKPPKIFDLQDFFEHKKTSVEGETLKARKCMYSVKYPTSDLNIKSFDLEQLRMFIGILDNKIGACAERINMLKNSQKVESNFNFGHNVDRYNSQIQPMMPLSYDTGSSSQMGLLNPNPMELMGSNYGLVNCANQFEDSVYSVIQNGALVNSTKVKEPEPMVHYDTNVMEDTTSKKDEVRLVCTEKTIDKVNSTNQVSEALDWESQFAEAEAWASDFGEFENWINQQSEHSDWTNLTEFVC* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1784 319 PANTHER MADS BOX PROTEIN 4 248 - -
Ahy3g1784 319 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
Ahy3g1784 319 ProSiteProfiles MADS-box domain profile. 1 52 IPR002100 GO:0003677|GO:0046983
Ahy3g1784 319 PANTHER PROTEIN, PUTATIVE-RELATED 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1784 Ahy-Chr3 35395853 35397542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1784 1 147 Type I MADS-box Gene Family AT5G55690 31.169 1.36e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1784 - - adu:107479968 598.201