Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1781 ATGAAGAAGGAAAATCAAAACGTTTCCGTTGTAGCTGTCCTCACTGCATTGTTGTTTGCAGGCACATTGTCATCAGTGTGTGCCTCCCACTCCAAGCAAACAAGCTTCAGTGGCGAACTCAGCCATGTGGAAACCATGTACATCAAGCAGCGGCAGTTGCTCTACTACAGGGACGAGTTCGGTGACAGAGGAGAGAATGTCACCGTAGACCCTTCCCTGGTGTTTGAGAACCAGCGCATCAGAAACGCCTACATTGCATTGCAAGCATGGAAGCAAGCCATTGTTTCCGATCCTCTCAACTTCACAGCAAACTGGGTAGGATCTGATGTGTGCAGCTACACTGGGGTCTACTGTGCACCCGCACTGGACAACCCTAAGATCCGCACCGTTGCTGGCATTGATCTGAACCATGCGGATATTGCTGGCTACTTACCGGAAGAGCTTGGTCTCTTGGTGGATCTTGCCCTCTTCCACATTAACTCAAACAGGTTCTGTGGCACATTACCGCACCGCTTCGATAAGCTCAAGCTCTTGTTCGAATTGGATCTCAGTAACAACCGCTTCGCCGGCAAGTTCCCTGCTGTGGTACTGAGACTCCCAACCCTCAAGTTCTTGGATCTGAGGTTCAACGAGTTCGAAGGTGGGGTCCCCAGAGAGCTCTTTGACAAAGATCTTGACGCCATTTTCATCAATCACAACAGGTTCGTCTTTGAAATTCCTGATAACTTAGGAAACTCGCCGGTTTCCGTTATTGTGTTGGCCAACAACAGGTTCCATGGTTGCATCCCTGCAAGCATTGGGAACATGTCGAACCTCAACGAGATCATTCTCATGAACAATGAGCTCAGAGCGTGCTTGCCTTCCGAGATTGGCTTGTTGAAGAACCTCACAGTCTTTGATATCAGCTTCAACCAGCTCTTGGGACCATTGCCGGACGCCATTGGAGGAGCTGTGAGCTTGGAGCAGTTAGACGTAGCGCACAACTTGCTCTCTGGGAACATTCCGGCCAGTATTTGCATGCTGCCAAATCTTCAGAACTTCACTTATTCTTATAACTTCTTCACAGGGGAGCCGCCGGCGTGCCTGAGGCTGGCATCGTTTGATGACCGGACGAACTGCTTGCCGGGAAGGCCGTTGCAGAGATCCGCGGCCCAATGTAGGTCGTTCTTGTCTAAACCTGTGGACTGTAACTCGTTTGGATGCAAGCCATTTGTTCCTTCCCCTTCACGTCCTTCGCCTCCTTCACCTTCTTCACCTTCTTCACCTTCACCCTCACCCTCTTCACCGCCTTCTATTCCTTCACCTTCTCTGCCTTCTCCCTCTTCGCCACCGTCTCCCCCTTCGCCTTCTTCCCCCAATGCACCAGGACAAGGTCCTCCTCCATCAACTCCTACTCCAATACCTTCTCCACCTAGAAGCGAACCTTCCCCAATTTATAGACCACCCTCTCCTCCCTCCACACCACCCTCTTTCCCTCCTATAAATACCCCGCCATCACCACCCTCTTTCCCTCCTATTAATACCCCGCCATCACCACCATCAACATCTCCACCTTACACTCCACATTCTCCTCCTCCGCCACCGCCTCTTTACTCTCCTCCATCGCCCCCGCCATCACCAATCTATACACCACCTTCTCCCACGCAGCCAGCACCTCCATCTGAGCCTTCACCTACCCCAACCCCAACGCCACCATACTGTGTCCGGTCGCCACCGCCTCCACCTCCGCCGCCAAATTCTCCATCAATACCGGCTCCTGAATTATCCCCGCCCCCACCTTCGCCTTATCATTATACCTCGCCGCCACCTCCCACTCACTCACCTCCGCCACCCACATATAACCAATCACCGCCACCTCCACCACCCTGCATAGAACCTCCTCCACCGCCACCACCTTCTCCCACACCTTATCTCCCACCACCATCCCCATCACCTCCACCTCCACCGGTTCAACATAATTCCCCGCGACCACATCATCCACCGGTCCACTATAGTTCACCACCACCGCCACCGGCACAATATAGTTCACCACCACCGCCACCGGCACAATATAGTTCTCCACCACCCCCTGTCCATTACAGTTCACCACCACCACCAACCCCTGTTCATTATAGTTCTCCGCCGCCACCAGCATCATCACCACCCTGCGAAGAAACTCCACCATCCCCGACCCCTTCCCCACCACCATCCCCTGTATATGAAGGGCCATTGCCACCTGTCGTCGGAGTCCCATACTCATCGCCTCCACCACCACCTTTCTATTAA 2265 0.5333 MKKENQNVSVVAVLTALLFAGTLSSVCASHSKQTSFSGELSHVETMYIKQRQLLYYRDEFGDRGENVTVDPSLVFENQRIRNAYIALQAWKQAIVSDPLNFTANWVGSDVCSYTGVYCAPALDNPKIRTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTLPHRFDKLKLLFELDLSNNRFAGKFPAVVLRLPTLKFLDLRFNEFEGGVPRELFDKDLDAIFINHNRFVFEIPDNLGNSPVSVIVLANNRFHGCIPASIGNMSNLNEIILMNNELRACLPSEIGLLKNLTVFDISFNQLLGPLPDAIGGAVSLEQLDVAHNLLSGNIPASICMLPNLQNFTYSYNFFTGEPPACLRLASFDDRTNCLPGRPLQRSAAQCRSFLSKPVDCNSFGCKPFVPSPSRPSPPSPSSPSSPSPSPSSPPSIPSPSLPSPSSPPSPPSPSSPNAPGQGPPPSTPTPIPSPPRSEPSPIYRPPSPPSTPPSFPPINTPPSPPSFPPINTPPSPPSTSPPYTPHSPPPPPPLYSPPSPPPSPIYTPPSPTQPAPPSEPSPTPTPTPPYCVRSPPPPPPPPNSPSIPAPELSPPPPSPYHYTSPPPPTHSPPPPTYNQSPPPPPPCIEPPPPPPPSPTPYLPPPSPSPPPPPVQHNSPRPHHPPVHYSSPPPPPAQYSSPPPPPAQYSSPPPPVHYSSPPPPTPVHYSSPPPPASSPPCEETPPSPTPSPPPSPVYEGPLPPVVGVPYSSPPPPPFY* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1781 754 PRINTS Proline rich extensin signature 440 456 - -
Ahy3g1781 754 PRINTS Proline rich extensin signature 458 475 - -
Ahy3g1781 754 PRINTS Proline rich extensin signature 417 438 - -
Ahy3g1781 754 PRINTS Proline rich extensin signature 404 416 - -
Ahy3g1781 754 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 11 452 - -
Ahy3g1781 754 MobiDBLite consensus disorder prediction 406 754 - -
Ahy3g1781 754 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 452 - -
Ahy3g1781 754 Gene3D Ribonuclease Inhibitor 83 248 IPR032675 -
Ahy3g1781 754 Pfam Leucine rich repeat N-terminal domain 86 118 IPR013210 -
Ahy3g1781 754 Gene3D Ribonuclease Inhibitor 249 391 IPR032675 -
Ahy3g1781 754 SUPERFAMILY L domain-like 83 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1781 Ahy-Chr3 35258501 35261734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1781 29 409 Leucine-rich Repeat extension Gene Families AT3G24480 75.654 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1781 - - zju:107431856 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2066 13 37723891 37726970 Ahy3g1781 3 35258501 35261734 hybridization