Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1758 ATGGGGGAAGGAGAAGGAGGTGATTGCGCTTTGAGAAATGTGGCATCGGATGCACCTACGGTGCCGGTGCCGGTGCCGCTGTCGGATATTCCCGCCAAGAAGCTTGCAAGGCAGCTTGATTTCACCGGCTTAGCCGGGATGCCGGGCGGCGCGCCATTTCCAGAGCACTCGCAGTTGCGGCAGCAACAGCAACAACAGCTTCAGCCGCAAGTGGTGGCACAGTCACAGTCACGGTCACATCCGCAGACAATGACGCAGCCGATGCTAATGATGCCGATGCCGCATCCGCCGCAGGCGCCACGCCTTTCAACGAGGGTTGGTAAATCAGAATCTCCAAAACCAAGATCAAGGACCAATTTTGAAACAAAAGAAGCTACTCCAAAGAAGCAAAAGCAATGCAATTGTAAACACTCAAAGTGCTTAAAGCTATATTGTGAATGTTTTGCATCGGGAATATACTGTGATGGTTGCAACTGTGTAAATTGTTACAACAATGTTGATAATGAAGCAGCCAGACGAGAAGCTGTTGGAGCTACCTTAGAACGTAATCCAAATGCATTTAGGCCAAAGATTGCGAGCAGCCCTCATGGACCACATGACAACAGGGAGGATGCTGGCGAAGTTGTTATATTGGGAAAGCACAATAAGGGATGTCATTGTAAAAAGTCTGGTTGCCTCAAGAAGTACTGCGAGTGTTTCCAAGCCAACATTCTTTGTTCCGAAAATTGTAAATGCATGGATTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAAGCATTGTTCCATGGAGATCAAAATATCAACATGACATATATTCAGCAAGCAGCAAATGCTGCAATAACTGGTGCTGTCGGTTCCTCTGGCTTTTCATCACCGCCAGCATCAAAGAAAAGAAAAGGTCAGGAACTCTCTTTTGTGCCAACAGCCAAGGATCCATCCATTGGAAAGCTAGGAAAACAGGCAAACCATGTCAAAGGTCCTTTACCCTCCTCCTCCTTTTCTCCTGCCCCTAGTACTCATGTTGGACCTGCAACATTAGGTCCTTCAAAATTTATATACAGGTCTGTATTGGCAGACATACTACAACCAGAGCACTTGAAGGAGCTTTGTTCAGTCCTAGTGCTACTATCTGGACAAGCCGCGAAGACAGTAACAGACCAGAAAAATATAATGCACAAACATATAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAACAACAGTTACCAAGCCAAACGGGAACTAATGTTGAGAAAGCTACGTCTGGTGATTGTTCAAGTGAGAACCGAATAGATAAGGTCAGCCCAGATAATTCTAGTTCAGACGGTGTTGGTGTCCTCAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGCGATGAGCATGATACAATGTTCATGACTGCTGTCTCTCCTAGTGAGCCAGTTTCTCACACTTGTAACATATCTTCTCAATTGCCTTGTGGACAAAAAATGACTGAGTTATATGCAGAGCAAGAAAAGATTGTTTTGACAAAGTTCAGAGATTTTCTTAATAGAGTTATCACTATGGGAGAAATAAACGAAACAAAATATTCTTCATTAGCCAGAAGTGAATTGGAGAGTAGGGACCCAGTTGTCAATGGCACTGAAAATGCTAGAACTGAGACAGTAGATGAAGGAGCCACTAAAATTGGTGTTGCCAAAGCTGTTGTTCATCCTCTGGCGACAAGTAGGAATTTGTCTAATTCAATATCTTTGGTCCATAGTAATCTTGTTCCTGAAAATGGTGAAAAAGAGGTATGA 1797 0.443 MGEGEGGDCALRNVASDAPTVPVPVPLSDIPAKKLARQLDFTGLAGMPGGAPFPEHSQLRQQQQQQLQPQVVAQSQSRSHPQTMTQPMLMMPMPHPPQAPRLSTRVGKSESPKPRSRTNFETKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVDNEAARREAVGATLERNPNAFRPKIASSPHGPHDNREDAGEVVILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNINMTYIQQAANAAITGAVGSSGFSSPPASKKRKGQELSFVPTAKDPSIGKLGKQANHVKGPLPSSSFSPAPSTHVGPATLGPSKFIYRSVLADILQPEHLKELCSVLVLLSGQAAKTVTDQKNIMHKHIEDQTETSLASSTQQQLPSQTGTNVEKATSGDCSSENRIDKVSPDNSSSDGVGVLKGRPMSPGTLALMCDEHDTMFMTAVSPSEPVSHTCNISSQLPCGQKMTELYAEQEKIVLTKFRDFLNRVITMGEINETKYSSLARSELESRDPVVNGTENARTETVDEGATKIGVAKAVVHPLATSRNLSNSISLVHSNLVPENGEKEV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1758 598 MobiDBLite consensus disorder prediction 397 452 - -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 287 341 - -
Ahy3g1758 598 SMART CXC_2 128 168 IPR033467 -
Ahy3g1758 598 SMART CXC_2 213 254 IPR033467 -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 43 127 - -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 400 444 - -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 108 127 - -
Ahy3g1758 598 PANTHER TESMIN/TSO1-RELATED 27 570 IPR028307 -
Ahy3g1758 598 ProSiteProfiles CRC domain profile. 129 253 IPR005172 -
Ahy3g1758 598 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 27 570 - -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 1 27 - -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 325 339 - -
Ahy3g1758 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 216 250 IPR005172 -
Ahy3g1758 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 130 165 IPR005172 -
Ahy3g1758 598 MobiDBLite consensus disorder prediction 56 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1758 Ahy-Chr3 34617863 34622766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1758 30 555 CPP Transcription Factor Family AT4G29000 55.435 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy3g1758 TCR 3.20E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1758 - - gmx:100777698 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2043 13 37019984 37024923 Ahy3g1758 3 34617863 34622766 hybridization