Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1751 ATGAATAGAGGAGGTGGTGTGGTTGAGCAAATGATGGGTTCCGGGAACCCTAACTGCTGGAACTCTCCTTCTTCTGATTTCTTGTCATACTCCTCCACTACTAATACTCCTTCTTCATACACCAACTTTTTTCTGAATCCACCACCACCATATGTACCTCATCCTCCCACTTCTTACTGGCATGAACATGAGCATGAGCATCACAATAATACTAATCCAGAGCTTCCCGGCGACTCATGGACTCACCTAATCATGAGTGGAGGAGTGGTGGGAGAAGAAGAGAATGGTAGAGGTATATGGCAGCATCATGCATCAGAGCTTGATGATGTGAAGCAAGAAAGGTCCGTAGAGAGCAGTTATGTGTACGGTGATGGAAGTGCAGGGAAACCTAACTGGTCTCACAATCAGATGATACTGCTTCCTCCTAATGCTTCTTCTTCTTCCAATTCTACTTCACCCAAATCATCATGTGTCACCTTCACCACCAGCATCTTGGACTTCTCCACCCAGCCCACGCTTCCTCCACCTCCACCTCCACCTCCACCTCCATCTTCCGCCGAGTGCAATAGCATCGCAGGTGGTGGAGCATCGAAGAAAGCTAGGGTTCAACAGTCGACGTCTTCGTCGACGTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATCGCAGCTCTCCATCAACTCGTTTCCCCATTTGGAAAGACTGACACTGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCTTACTTGGTCAATGGATCACCAAACATGAAACACCAAAATCCTGTTCAAGGAGAGAAGAGTTGTTTATTCCCTGAAGATCCCGGTCAGCTGCTGAATGAAAACTGCTTGAAGAAGAGGAAAGCAACTACTCAGCAGGAGGGTTCCCAGCATCAAGAAGAAGCAAAGAAGGACCTGAGGAGTAGGGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCTGATTATTGGTCTCCTGCTTTTGGTGCTGGAGGATTTCGATAG 1065 0.4723 MNRGGGVVEQMMGSGNPNCWNSPSSDFLSYSSTTNTPSSYTNFFLNPPPPYVPHPPTSYWHEHEHEHHNNTNPELPGDSWTHLIMSGGVVGEEENGRGIWQHHASELDDVKQERSVESSYVYGDGSAGKPNWSHNQMILLPPNASSSSNSTSPKSSCVTFTTSILDFSTQPTLPPPPPPPPPPSSAECNSIAGGGASKKARVQQSTSSSTFKVRKEKLGDRIAALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLVNGSPNMKHQNPVQGEKSCLFPEDPGQLLNENCLKKRKATTQQEGSQHQEEAKKDLRSRGLCLVPVSCTLQVGSDNGADYWSPAFGAGGFR* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1751 354 MobiDBLite consensus disorder prediction 55 79 - -
Ahy3g1751 354 PANTHER OS05G0228400 PROTEIN 55 339 - -
Ahy3g1751 354 MobiDBLite consensus disorder prediction 133 169 - -
Ahy3g1751 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Ahy3g1751 354 MobiDBLite consensus disorder prediction 170 186 - -
Ahy3g1751 354 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 55 339 - -
Ahy3g1751 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 212 264 IPR036638 GO:0046983
Ahy3g1751 354 Gene3D - 201 261 IPR036638 GO:0046983
Ahy3g1751 354 CDD bHLH_AtbHLH_like 208 259 IPR045239 -
Ahy3g1751 354 MobiDBLite consensus disorder prediction 133 212 - -
Ahy3g1751 354 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1751 Ahy-Chr3 34502720 34506717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1751 181 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 71.930 5.16e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1751 - - ahf:112790234 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2035 13 36760353 36764088 Ahy3g1751 3 34502720 34506717 hybridization
Ahy3g1751 3 34502720 34506717 Ahy15g2912 15 148803551 148809149 PCT
Ahy3g1751 3 34502720 34506717 Ahy5g2359 5 96980909 96986285 PCT
Ahy15g2912 15 148803551 148809149 Ahy3g1751 3 34502720 34506717 PCT
Ahy5g2359 5 96980909 96986285 Ahy3g1751 3 34502720 34506717 PCT