Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1680 ATGGCCATGCCATGCAAATTGTTTTTCCGAAATCCCCCAGATGGTCTTCTTGAGATATCTGACAGGGTCTATGTTTTTAATTGTTGTTTCAACATTCGATGTGATTGGAGAGACGAATCTTACGAAGTCTACGTGAACGGGATTGTTGGTCAATTTCGAGAGAATGTGCCTAACGCTTCCATTATGGTATGCAATTTTCGCGAGGAAAACACTAAAAGCAAGTTGGATAACATATTCTCTAAGCATGAAATTAATCTCATGAACTATCCTTGCCACCACCATGGTTTCCCTATGCTCAAATTGGAGGCCATACATCATTTTCTAAATTCATGTGATAGTTGGCTCTCACATGGGCAAAATAAGGTGTTGTTAATGCATTGTGAGCGTGGTGGCTTGCCAGTTTTGGCCTTCATGTTGGCTGCATTGTTGATTTTCTTGAAACAATATGAAGGGGAGCAGAGGACGTTAGATATGGTTTACAAGCAGGTACGTCGTGATTTTTTACAATCCTTAACAATGGTGAATCCAATCCCTTCCCAATTGCGGTATTTACGATATGTTTCCAAGACCAATATGGCCTTTGATTGGCCTTCATTGGATAGGACACTTAGGTTGGACTACATCATTATGACATTTCTTCCAAACTTTAATGGGAATGGTGGATGTTTTCCAATATTTAGAATTTATGGCGAAGATCCCTTTCTTGTTGACAAGAATCCTAAGATCCTATACTCAACACCAAAGAGTCCCAAAAACATTCAAGCTTATAAACAGGGAGAGCGTGATGATAAAATCAAAGTCAATATCAACTGTCGGATTCAAGGTGAGGTGCTGATTGAAAGTGTTAATTTGGATAGTGACTTGGAAAATGAACAGATGATATTCCAAACGATGATTAACACAAATTTCATTAGATCTAATTTGTTGATGCTTAATCGGGAGAAAATTGATATTTTGTGGGATGCAAAAGATCGCTTCCCAAGGGATTTCAAACTAGAGATAACTTTCACAGAGAAAGATGTTGCTCCAAAGACTGAGTCATCCTCTAGCTTTGAGGAAAGGGAGGGATTACCAATTGAAGAATTTACCAAAGCCAAAGAGATTTTTAACCATGGAGATTGGACGAGTCCTAATGATGAAGATCACACAGTAAATGATACTAACACAATCAATGATACCTCAATTTCACCACAAACACCTCCATTGAGGTCTCCCAGAAGTGATAAAAATGTTGATGAGTCTCTTCCTCATCAGTTGCATTCAAAGTCACAAAATCCTAATACTAATGTAACAAGACCTGATTTGTTGCTTTCACAGCAAAAAACCCAACCCCCACCGGATCAAATTAGAGCTCCTCTATCCCCACCAACTCCTCCAAAGAATGAAACATTTGTAAGAGTTGGATCCCCTCTTTCTCCTCCAACTCCAAATGCTACAATGCCTACTACCACCCCACCTCCGCCGCCAACGCCACCCCCGGTTGGAGACCATTACGCTAACAATGGTTTTCCAACTTCATTGTGTATTGGTCGTGGAAAGAATGACACTGGCAATCACACGATGCATTCAATGAGTAACACCAAAAAGTTAAAAACATTGCATTGGTTAAAATTATCTCGAGCAGTGAAAGGAAGTTTGTGGGCTGAGGCACAAAAATCTGGTGAAGCTTCCAAGACACCAGATATTGATATGTCTGAGCTTGAAAATCTCTTCTCAGCAACAACACCAAGTTTAGGCCAAGCAAAGAAGTCAAAGATCCAAAACTTAGTTACGCCAAAATCTGATAAAGTGCAACTGATTGAACATACACGAGCATATAATTGTGAAATCCTTCTTTCAAAAGTGAAAGTCCCGTTGAAGGATTTAATGAGCTCAGTTTTAGCATTAGAAGAGACAGCATTAGATATTGATCAGGTTGAAAACCTGATAAAGTTTTGTCCAACAAAGGAAGAGAAGCAAGTACTTAAGGATTATGACGGAGACAAGGAAAAATTGGGGAGATGTGAACAGTTCTTCTTAGAGTTGATGAAAGTTCCAAGGGTAGAATCCAAGCTGAGAGTTTTTTCATTCAAGATTGAATTCAATACTCAGGCTTCTGACCTTAGAAATAACATCAATATTGTTAATGATGCTGCAGAAGAGATCAAAAACTCTGTCAAATTAAGAAGAATCATGCAAACAATACTTTCTCTAGGAAATGCTCTAAACCAAGGAACTGCAAAAGGTTCTGCCATTGGATTTAAATTAGATAGTCTTCTTAAACTCTCAGAGACACGTGCACGGAATACAAAGATAACTCTCATGCATTATCTTTGTAAGGTTTTGAAAAACAAGCTTCCAGAAGTTTTAGACTTCACAAATGATCTTCCGAATTTAGAGCCAGCAACAAAGATCCAAATGAACTTCCTTGCAGAGGAGATGCAAGCAGTAAGTAAAGGATTAGAAAAAGTTGAGCATGAACTACTAACCTCAGAAAATGACGGTTCTATATCAGAAATTTTCTGCAAGAATCTGAAAGAGTTCCTACGTTCTGCGGATGTTGAAGTCCGTGCATTGGCTTCGCTATATTCTATTTTGGGTAGGAATTTGGATGCCTTAATTATTTATTTTGGAGAAGATCCATCTCGCTGCACTTTTGAGCAAGTTGTCACAACATTGCACAACTTCACTGGAATGTTTTGTAAAGCCCAGGAAGAGCACTTCAAGGAGCTTGAGCTTGAAATGAAGAAAACAAAAGAAAAAGATAAAAAGAAATACCAATCAAAACTGACACTAGCGAATACCGATACCAATTTACACTAA 2802 0.3851 MAMPCKLFFRNPPDGLLEISDRVYVFNCCFNIRCDWRDESYEVYVNGIVGQFRENVPNASIMVCNFREENTKSKLDNIFSKHEINLMNYPCHHHGFPMLKLEAIHHFLNSCDSWLSHGQNKVLLMHCERGGLPVLAFMLAALLIFLKQYEGEQRTLDMVYKQVRRDFLQSLTMVNPIPSQLRYLRYVSKTNMAFDWPSLDRTLRLDYIIMTFLPNFNGNGGCFPIFRIYGEDPFLVDKNPKILYSTPKSPKNIQAYKQGERDDKIKVNINCRIQGEVLIESVNLDSDLENEQMIFQTMINTNFIRSNLLMLNREKIDILWDAKDRFPRDFKLEITFTEKDVAPKTESSSSFEEREGLPIEEFTKAKEIFNHGDWTSPNDEDHTVNDTNTINDTSISPQTPPLRSPRSDKNVDESLPHQLHSKSQNPNTNVTRPDLLLSQQKTQPPPDQIRAPLSPPTPPKNETFVRVGSPLSPPTPNATMPTTTPPPPPTPPPVGDHYANNGFPTSLCIGRGKNDTGNHTMHSMSNTKKLKTLHWLKLSRAVKGSLWAEAQKSGEASKTPDIDMSELENLFSATTPSLGQAKKSKIQNLVTPKSDKVQLIEHTRAYNCEILLSKVKVPLKDLMSSVLALEETALDIDQVENLIKFCPTKEEKQVLKDYDGDKEKLGRCEQFFLELMKVPRVESKLRVFSFKIEFNTQASDLRNNINIVNDAAEEIKNSVKLRRIMQTILSLGNALNQGTAKGSAIGFKLDSLLKLSETRARNTKITLMHYLCKVLKNKLPEVLDFTNDLPNLEPATKIQMNFLAEEMQAVSKGLEKVEHELLTSENDGSISEIFCKNLKEFLRSADVEVRALASLYSILGRNLDALIIYFGEDPSRCTFEQVVTTLHNFTGMFCKAQEEHFKELELEMKKTKEKDKKKYQSKLTLANTDTNLH* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1680 933 Gene3D Formin, FH2 domain 518 903 IPR042201 -
Ahy3g1680 933 Coils Coil 894 914 - -
Ahy3g1680 933 Gene3D - 203 337 - -
Ahy3g1680 933 MobiDBLite consensus disorder prediction 474 495 - -
Ahy3g1680 933 MobiDBLite consensus disorder prediction 417 447 - -
Ahy3g1680 933 Coils Coil 800 820 - -
Ahy3g1680 933 Pfam Formin Homology 2 Domain 525 893 IPR015425 -
Ahy3g1680 933 ProSiteProfiles Formin homology-2 (FH2) domain profile. 520 919 IPR015425 -
Ahy3g1680 933 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 338 IPR035892 -
Ahy3g1680 933 SMART it6_source 520 933 IPR015425 -
Ahy3g1680 933 SUPERFAMILY Formin homology 2 domain (FH2 domain) 485 911 - -
Ahy3g1680 933 Pfam C2 domain of PTEN tumour-suppressor protein 201 338 IPR014020 -
Ahy3g1680 933 MobiDBLite consensus disorder prediction 381 405 - -
Ahy3g1680 933 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Ahy3g1680 933 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Ahy3g1680 933 Gene3D Protein tyrosine phosphatase superfamily 14 194 IPR029021 -
Ahy3g1680 933 SMART PTEN_C2_2 198 338 IPR014020 -
Ahy3g1680 933 PANTHER FORMIN-J 1 917 - -
Ahy3g1680 933 Coils Coil 698 718 - -
Ahy3g1680 933 MobiDBLite consensus disorder prediction 370 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1680 Ahy-Chr3 32370367 32399777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1680 466 918 Protein tyrosine phosphatase (PTP) family AT5G58160 63.736 1.59e-180 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1680 - - ahf:112775940 1819.28