Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1646 ATGGCACCCCGGGACCTACCCGCTGTTCTTTCCGGATCCAACTCGATCCAACCACTCTCCAGAGAGATCCGATACAGAGGGGTGAGGAAGAGGCCATGGGGCCGCTACGCCGCCGAGATCCGCGATCCTGGCAAGAAAACACGTGTCTGGCTCGGCACTTTCGACACGGCTGAGGAGGCTGCACGTGCCTACGACTCCGCGGCACGTGAGTTCCGCGGACTTAAGGCAAAGACCAATTTCCCCACGCCGTCCGAGATCATCAACAGCCCCGCCGCGGGTAGTCCTAGCCAGAGCAGCACTCTAGACTCTTCCTCTCCTCCGCCGCCGGCACCCACGCCGCCAACGCTCGACCTCACACTCTCCTCCTTAGCCGCCTCCGCCGACACAACTATGGTGTTCCCGGTGGCTCGCCCGGTTATGTTCTTCGAAGCGTTCGGTCGTGCTGGGATGTGCGGGTTTGACCGCCCCGTTGCCGATTTTCGACGCGCCGCTGTTGCCGTTGCTGCCTCCGGCGCAGCGCATAGCGATTCTGATTCGTCCTCGGTCGTGGATTATGAGCGTGTGCCTCATCGGAGACTGATGGATCTTGACCTCAACGTTCCTCCTCCCCCTGAGGTAGCCTGGTCTGGCGGTTAA 636 0.6179 MAPRDLPAVLSGSNSIQPLSREIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDSAAREFRGLKAKTNFPTPSEIINSPAAGSPSQSSTLDSSSPPPPAPTPPTLDLTLSSLAASADTTMVFPVARPVMFFEAFGRAGMCGFDRPVADFRRAAVAVAASGAAHSDSDSSSVVDYERVPHRRLMDLDLNVPPPPEVAWSGG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1646 211 Coils Coil 57 77 - -
Ahy3g1646 211 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Ahy3g1646 211 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Ahy3g1646 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 11 198 - -
Ahy3g1646 211 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Ahy3g1646 211 MobiDBLite consensus disorder prediction 82 115 - -
Ahy3g1646 211 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Ahy3g1646 211 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Ahy3g1646 211 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Ahy3g1646 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 198 - -
Ahy3g1646 211 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Ahy3g1646 211 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Ahy3g1646 211 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1646 Ahy-Chr3 31153472 31154783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1646 13 173 AP2-EREBP Transcription Factor Family AT3G15210 54.286 5.93e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy3g1646 AP2 1.70E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1646 K09286 - gmx:100786709 188.348