Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1632 ATGAGGTTATGTAGCGATCTCTTTCAAAGCTGCTTCCCCGGAACTTCTGGCACATCTCCAAATGATTCAATTCAGATAAAGTGGCCAATCTTATCCTACCGGGAACTTGCAAAAGTTACAAATAATTTTGACCAATGTAATATGCTTGAAAAGATAGACTTGGAGAAAGTTTACCATGGCAAAACGAATGGGCGTGAGGTTGCAATTGAAAGATATTCCAATAAAGAGATGCACATATTCCAGCAGTTCCTCTATGAAGATTTGATCTCAAATATCTTACCTCATAAGAATCTGGTGTCATTTCATGGCTGTGCCTTTCATCATAAGGAGTTCCTGCTAGCACATGAATACCTCTCAAATGGCACTCTTGCTTCTTATCTTCAACTTGGAATCTCACACAGCAGCACACTACATTGGCTCACTAGATTAGACATTGCAATTGATGCTGCAAATGCATTGAGCTATCTTCATTATCATGGCATCGTCCATCGCAATGTAAAATCCCGCAATATTCTGCTAGACAAGAACCTTTGTGCTAAACTTGGTGGCTTACATTTGTCAAGGAAATTTCCAGAAGGAGTTTCAATCAATGATACCTATGTTACAAGTGATGTAGTAGGGACATGTGGTTACATAGACCCAGAATATGTATCACATGGCAGGGTTGGTGCCACAGTTGATGTTTACAGCTTTGGAGTGGTTTTGTGTGAGCTTATATCATCCAAACTCGCTAAGTATTGGGAAGGTTGCGAGGAAGAGAGTATCGCTACAATTTTAAGCAAAAAAATTGGAAACCAAGATATGAACAAGGTGTTGGATTCAAGAGTTGGCTTCCAATCAGACCATAAAATCAAGCAGATGATAATTGCTGTAGCAGAGCTTGCACTTGAGTGCATGTCATCTCCACAAGAACTAAGGCCAAACATGGAACAAGTGCTAGAGATCCTCAATGATATAAAACATGAGAGATTTGAAACAAAGTCAGAAAAAGGAAAACTTAAGGATGGGCGCGAAATTGCAGTAAAACGTTTCCACAACGAGACAGACAAGTCCATCAAGCAATTCATGAAAGAAATAGAGATCTTAAGTTTATTGCAGCATAAAAATTTGGTGTTACTTTATGGCTGCAGCTCTCGTCACAGCAAGAACCATCTTCTAGTATATGAGTACATCTCCAACGGCACCCTTTCTAAACATCTTCAAGGACCTTCCAGTGAAAAGTTATCATGGCTTGAAACTGCAACCGCATTAGTATATCTTCATGATTCAGGCATCATCCATCGTGATGTAAAAGGAAGCAACATTCTCTTGGATGAAAACTTGACTGTTAAGGTTGCGGATTTTGGACTCTCAAGGTCACTTCCGAGTTCTGTAACACATGTTTCAACCATACCAGTGGGAGCTCATGCTTACATAGATCCAGATTACTATGAATCTGGAAGAGTCAGTGATAGAAGCGATGTCTACAGCTTTGGCGTGGTCTTGTTTGAGCTCATATCATCAAAACCACCTAGCTTGTTGGATGATGGAGAGAGTGTTACTCTAGCCAAGTTCGGAATCACTAAGATGTTAAACAATGCAATGGAGGAGCTGGTGGATCCAATTTTCAGGTTTGGTTCAGACCAAAAGTTGATGGAAATGATAGCAGCTGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAAAGATCTTAGACCTTCTATGAAACAGGTGCTGGAGACCCTAGAAGGAATAAAGAAGGGAACATGGGGATTCAACCAAATAACATAG 1773 0.4033 MRLCSDLFQSCFPGTSGTSPNDSIQIKWPILSYRELAKVTNNFDQCNMLEKIDLEKVYHGKTNGREVAIERYSNKEMHIFQQFLYEDLISNILPHKNLVSFHGCAFHHKEFLLAHEYLSNGTLASYLQLGISHSSTLHWLTRLDIAIDAANALSYLHYHGIVHRNVKSRNILLDKNLCAKLGGLHLSRKFPEGVSINDTYVTSDVVGTCGYIDPEYVSHGRVGATVDVYSFGVVLCELISSKLAKYWEGCEEESIATILSKKIGNQDMNKVLDSRVGFQSDHKIKQMIIAVAELALECMSSPQELRPNMEQVLEILNDIKHERFETKSEKGKLKDGREIAVKRFHNETDKSIKQFMKEIEILSLLQHKNLVLLYGCSSRHSKNHLLVYEYISNGTLSKHLQGPSSEKLSWLETATALVYLHDSGIIHRDVKGSNILLDENLTVKVADFGLSRSLPSSVTHVSTIPVGAHAYIDPDYYESGRVSDRSDVYSFGVVLFELISSKPPSLLDDGESVTLAKFGITKMLNNAMEELVDPIFRFGSDQKLMEMIAAVAELAFQCVQCPKDLRPSMKQVLETLEGIKKGTWGFNQIT* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1632 590 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 330 590 IPR044652 -
Ahy3g1632 590 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 330 IPR044652 -
Ahy3g1632 590 ProSiteProfiles Protein kinase domain profile. 43 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1632 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Ahy3g1632 590 SUPERFAMILY Protein kinase-like (PK-like) 330 580 IPR011009 -
Ahy3g1632 590 PANTHER TYROSINE KINASE FAMILY PROTEIN 330 590 - -
Ahy3g1632 590 PANTHER TYROSINE KINASE FAMILY PROTEIN 27 330 - -
Ahy3g1632 590 Gene3D Phosphorylase Kinase; domain 1 332 391 - -
Ahy3g1632 590 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Ahy3g1632 590 Gene3D Phosphorylase Kinase; domain 1 18 117 - -
Ahy3g1632 590 ProSiteProfiles Protein kinase domain profile. 313 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1632 590 SMART serkin_6 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1632 590 SMART serkin_6 324 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1632 590 Gene3D Transferase(Phosphotransferase) domain 1 392 585 - -
Ahy3g1632 590 SUPERFAMILY Protein kinase-like (PK-like) 18 320 IPR011009 -
Ahy3g1632 590 Pfam Protein tyrosine and serine/threonine kinase 332 576 IPR001245 GO:0004672|GO:0006468
Ahy3g1632 590 Pfam Protein tyrosine and serine/threonine kinase 59 316 IPR001245 GO:0004672|GO:0006468
Ahy3g1632 590 PRINTS Tyrosine kinase catalytic domain signature 115 128 IPR001245 GO:0004672|GO:0006468
Ahy3g1632 590 PRINTS Tyrosine kinase catalytic domain signature 226 248 IPR001245 GO:0004672|GO:0006468
Ahy3g1632 590 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1632 Ahy-Chr3 30771883 30776294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1632 331 580 Receptor kinase-like Gene Family AT1G25390 52.874 5.84e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy3g1632 PK_Tyr_Ser-Thr 7.20E-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1632 - - var:108343962 744.962