Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1623 ATGGACAAGGCTGCATTACTAGGGAGTGTAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACAGTTCCAAGTGAAACTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTAAAGCACAACATTGTAATTTCAGTTTGCTGTGATGATAGACCAGAACTTTTCAGTGAACTCATTCAAGTCCTAAAAGGGTTGAGGCTCATAAATCAAGATCAGAACATATTTAGAAGCAGCAAACAGCTAATAGAAGCAGCAAAACAGAAGCAGCAAAACATACTCAAAATAAAAAAACATCAGAAAATCAGAATCCAAAATCAAGAAGGCAACATAGAACAGGCGAGTTCATAG 402 0.3731 MDKAALLGSVVDHVKDLKRKAMDVSKSITVPSETDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGLRLINQDQNIFRSSKQLIEAAKQKQQNILKIKKHQKIRIQNQEGNIEQASS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1623 133 Coils Coil 114 133 - -
Ahy3g1623 133 PANTHER TRANSCRIPTION FACTOR BHLH30 1 86 IPR045847 GO:0003700|GO:0006355
Ahy3g1623 133 PANTHER TRANSCRIPTION FACTOR BHLH51 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1623 Ahy-Chr3 30324399 30325569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1623 2 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 38.095 6.32e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1623 - - ahf:112790105 244.973