Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1619 ATGGGTCAGAAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTAACGTGGATTATATGAATGAGGATGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAAAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCACCGAATAATTACGGCATTGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCACTTCTGGATCCTCGATTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAAGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGCATATGCAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTATAATCATCACATGGATGCCGATGGTACTTTGCGCAATTTATTCTGGTGCGATGGTCTCAGTAGGGCAGACTACTCATTATTTGGCGACGTGCTGGCTTTTAATGCTACCTATAAGAGAAATAAATATATGTGTCCATTGGTGGTATTTTCTGGTGTCAATCATTATAACCAAACAATTATCTTTCCTACTGCTTTATTTTGCGATGAGAAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGCGGCAATGAATGGGAAAGCACCTGTTTCAGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGA 1110 0.4135 MGQKFSHEGVNSEHTSYDQYEQEEEKHEEVNVDYMNEDDTNVEPMFDYHGFDEGDEDVCHFHFSDVDIAFEFYNRYARTKGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYEYLSFTQKDMYNKIAKQRRQLPGDAYAALKYLEDQATNDPSLYYNHHMDADGTLRNLFWCDGLSRADYSLFGDVLAFNATYKRNKYMCPLVVFSGVNHYNQTIIFPTALFCDEKKDTYRWLLQQLKAAMNGKAPVSVITDGDLSMKFAIEKEFPNAHHRLCA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1619 369 Pfam FAR1 DNA-binding domain 71 161 IPR004330 -
Ahy3g1619 369 Coils Coil 17 37 - -
Ahy3g1619 369 Pfam MULE transposase domain 281 368 IPR018289 -
Ahy3g1619 369 MobiDBLite consensus disorder prediction 1 16 - -
Ahy3g1619 369 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 368 IPR031052 GO:0006355
Ahy3g1619 369 MobiDBLite consensus disorder prediction 1 28 - -
Ahy3g1619 369 PANTHER OS02G0262500 PROTEIN 57 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1619 Ahy-Chr3 30283083 30284246 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1619 FAR1 5.00E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1619 - - ahf:112723376 721.465