Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1611 ATGGCTTCTAATCTTCCAACTATCGCTGCCGCAACGGCAAGGTCCGCTGCCACGACGACGTCGTTTCAGGAAAAACATCACCGTTCGGTCTTCGAGCTCTCACCTAGCGTCTTCGACTCTTGCTACTTTCTACCTTCTACTCACTCTTCGATTTACGAGCCCAACGACAATGATCGTCGCAACGTAGGCCTTGAAACGCCCTCAAACAACGTCGTCGCCGATGGTCCCCAAGACACCATCGTTTCAGCGCCTAGGTGGACGTGCAACACCTGTAAGGCCCAATTCGATTCCCTCCAAGACCAGCGTTCGCATTTCAAATCTGATATTCATCGATTCAATGTGAAGCTGACAGTTGCGGGAAAGAATATTGTTAAGGAAGAGGATTTTGAGGTGTTGACATCTGAATTTGTCAAAGACTATGATGTTTCAAGCATATCAGGATCAGAGAGTGACAGCGACAGTGAAAATGAGTCTCAAAATCGCAATGAAGTGCGTGACAAATCAAGAGAAATTCTTAAACAAAAGCTATTTGTTGGTCTTCAATCAGGTCAAAGTGTTTCTCTCTGGAAGTGCTTGATTATGAATATGAGTGATGAGAATGGAAGTGCAGAGAACGAAGTGTGTGAGAGGTTGAAATCTCTGACTCTTGAGCCCAGGGATAATAGTCATTTGCGAATCGTACTGCTTGCATCTGGTGGACACTTTGCTGGTTGTGTCTTTGATGGTGATGCAGTTGTGGCTCACAAGACCTTTCACAGATATGTTGTGAGGGCCAAGGCTGGAAAGAAACAATCATCAAAAGATGCTTCTGGAAGGGCTGCACATTCTGCTGGTGCTTCACTTCGTCGTCATAATGAACTTGCATTAAAAAAGGAAGTTCAAGAACTGCTTACTTCTTGGCGACCTTATTTTGATGCTTCCAAATGCATTTTTATAAATGCACCTTCAAGTAGTCGTCAATTGTTCTATAATGGAGAAAAATCACTCTTTTCCAATCCGCATTGTGCTATCAGAAATATTCCTTTCACTGTTCGGAGGCCTACTTTTAGGGAAGCAAAACGTGTATATAGCCAGTTGACTCAAGTATCCTTTGAAACGGATGAGAAGGAAACATTACAAAGCAACCAAGAGGGCTTAATATCAATTCCAACTGCTGTAAGAAATACAGACCTACTCTCCAGCAAAGGGGACATGATTGAGTTGGATAACAAAGATGAGGCTAAAGCTAGTTCAAGCAAAAAGGATGCACAACCTGTTTTGAGTGATGAAGAGAGTGAGAATGAGCTACCTGGCATATCAACTCCATTACATCAAGCAGCAAAATCTGGAGATGCTCACAATGTCATGGAACTCCTGGAACAGGGCTTGGATCCTTGCATTAAAGATGAAAGGGGGCGGACTCCATATATGTTGGCTAATGAGAAGGAAGTCAGAAATATTTTTAGAAGGTTCATGGCATCAAACCCTGACAAATGGGATTGGCATGCTGCAAAAGTTCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAACAGGCAGAAAAAGAAGCCAAGAGAAAAGCCAGAGCAAAAGAGTTAAAGAAACTAAAGAAAGCCAAAGAAAAGAGGGCACAGGCAGAAGCTGCGTTGCTTAAGAATGACTCGAAGGCTGCAGAGAAGCAAATGACTGCCCCAGCTTCTTCTAAGGGACAATCACAATCCAAAAGTGGTGTGAAATTATCTAAAGAGGAGGAAATAAGAAGAGCGCAGGCTGAAGAAAGAGAAAAGAGAGCAGCTGCCGCAGAGAGAAGAATAGCTGCCCTCAAAATTCAAGAGAACTGTTCAACCTCCACACATGCCATTTCAGAACCTAAAGGAGGATTAGCTGGTGAAATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGCTATAATTATAATTACTGCAGCACATCATGCATGCACGTACACAGGGAGTTCCTAGAAGATGGATGA 2001 0.4323 MASNLPTIAAATARSAATTTSFQEKHHRSVFELSPSVFDSCYFLPSTHSSIYEPNDNDRRNVGLETPSNNVVADGPQDTIVSAPRWTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTVAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDSDSENESQNRNEVRDKSREILKQKLFVGLQSGQSVSLWKCLIMNMSDENGSAENEVCERLKSLTLEPRDNSHLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEVQELLTSWRPYFDASKCIFINAPSSSRQLFYNGEKSLFSNPHCAIRNIPFTVRRPTFREAKRVYSQLTQVSFETDEKETLQSNQEGLISIPTAVRNTDLLSSKGDMIELDNKDEAKASSSKKDAQPVLSDEESENELPGISTPLHQAAKSGDAHNVMELLEQGLDPCIKDERGRTPYMLANEKEVRNIFRRFMASNPDKWDWHAAKVPSALTKEMEESQAAKQAEKEAKRKARAKELKKLKKAKEKRAQAEAALLKNDSKAAEKQMTAPASSKGQSQSKSGVKLSKEEEIRRAQAEEREKRAAAAERRIAALKIQENCSTSTHAISEPKGGLAGEIYCSCCNSSLAGKVPFHRYNYNYCSTSCMHVHREFLEDG* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1611 666 Pfam Bacteroidetes VLRF1 release factor 226 365 IPR041175 -
Ahy3g1611 666 Coils Coil 503 557 - -
Ahy3g1611 666 Coils Coil 578 607 - -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 143 166 - -
Ahy3g1611 666 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 23 661 - -
Ahy3g1611 666 ProSitePatterns Zinc finger C2H2 type domain signature. 88 110 IPR013087 -
Ahy3g1611 666 ProSiteProfiles Ankyrin repeat region circular profile. 434 463 - -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 510 524 - -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 402 421 - -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 402 438 - -
Ahy3g1611 666 Gene3D - 425 544 IPR036770 -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 574 588 - -
Ahy3g1611 666 ProSiteProfiles Ankyrin repeat profile. 434 463 IPR002110 GO:0005515
Ahy3g1611 666 SUPERFAMILY Ankyrin repeat 434 488 IPR036770 -
Ahy3g1611 666 Pfam Vms1-associating treble clef domain 629 661 IPR041540 -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 556 573 - -
Ahy3g1611 666 MobiDBLite consensus disorder prediction 509 588 - -
Ahy3g1611 666 SUPERFAMILY beta-beta-alpha zinc fingers 84 118 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1611 Ahy-Chr3 30016954 30024453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1611 25 613 C2H2 Transcription Factor Family AT1G01930 54.605 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1611 K26089 - gmx:100527709 828.55