Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1552 ATGGGAGTTCCAGAGAAGGATCCTCTTTCTCAATTGAGCTTACCTCCTGGTTTTAGATTTTACCCCACAGATGAGGAGCTTCTTGTTCAGTACCTATGTCGCAAGGTTGCTGGCAACCATTTCTCACTTCCTATCATCGCGGAAATCGATTTGTATAAATTCGACCCTTGGATCCTCCCAGGTAAAGCAATATTTGGGGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAGTATCCGAACGGTTCGCGACCGAACAGGGTTGCTGGCTCTGGGTACTGGAAAGCCACAGGAACAGATAAAGTAATCACTACCGAAGGCAGAAAAGTTGGAATCAAGAAAGCACTTGTTTTCTACATTGGCAAAGCACCCAAAGGCACCAAAACAAACTGGATCATGCACGAGTACCGTCTCCTCAACGGTTCTCAAAAGAGCCTCGGCAGCACCAAGCTAGATGATTGGGTTTTGTGTCGGATATACAAGAAGAACTTGAGCTCATCGCAAAATGTCAATATGCCAAGCTTTACGAGCAAAGAATGGAGCAATGGATCGTCTCCTTCTTCATCGTCTCACATCGACGACATGCTCGAATTGCCGGAGATCGACGACCGGTGCTTCGCCTTACCGCGGGTTAACTCGCTGCAGCACGAGGAAAAGCTCACCCTTGGCGCCACAGGCAATAATTTCCCGGACTGGGTCAACTCGGGGGGTCTCGACTCGGTCCCTGAGTTCGGGAGCCAAACTCAGGGGATGACAAGTTACGATGGAAATGACCTATATGTCCCCTCCGCGTCACAGTTCTGCCACGTCAACACAATGGTTGTGCCGGGTAACCCGACGGAGGAGGAAGTCCAGAGCGGCATCAGGACCCAGCGGATTGATGAGAATTTCGGGTTATTTCAACAGAATTCGAATGTATTCACCCACCGGTATTTGTCGAGTTCGGGTGACTCATTCGGATTCGGATACCCGAATCAGCAATTTGGATTCGGATTCAGAGAATGA 1008 0.4911 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGNHFSLPIIAEIDLYKFDPWILPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLNGSQKSLGSTKLDDWVLCRIYKKNLSSSQNVNMPSFTSKEWSNGSSPSSSSHIDDMLELPEIDDRCFALPRVNSLQHEEKLTLGATGNNFPDWVNSGGLDSVPEFGSQTQGMTSYDGNDLYVPSASQFCHVNTMVVPGNPTEEEVQSGIRTQRIDENFGLFQQNSNVFTHRYLSSSGDSFGFGYPNQQFGFGFRE* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1552 335 PANTHER NAC TRANSCRIPTION FACTOR 56 1 306 - -
Ahy3g1552 335 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 306 - -
Ahy3g1552 335 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Ahy3g1552 335 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Ahy3g1552 335 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Ahy3g1552 335 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1552 Ahy-Chr3 27969827 27971486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1552 1 331 NAC Transcription Factor Family AT4G27410 56.410 6.30e-116 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy3g1552 NAM 4.90E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1552 - - adu:107478293 663.299