Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1550 ATGGCTTTCCGCGTCTCTTGCTCGGTGTCGGAGCTCGGAGGCGGCAACTGTTTTCTGCGTCTCTTGCTCGGATTCGATGTCGGTCTTGCCCTTGTTGAAGGAATAGTTGCTTTGTTGCATTGTTTCAGGGACTGGTATAACCTTGAGAAGTCGAAGCAGGTGAAGGCATTTCGTTGTGGAGAGTATGGTGAGTGCATCGAGAAGGCGAAGTTCTGGAAGTTAGTTCATCAAAACACTCAGCACCAACTTCTTCTAAAGTTTATTCTGCAACAACTTTTGGCAGTTGCTCCATCCTGGTTCATTCACTTGGATTTTCTTGGCTTGGTGGAGAAATTTTACTATCTCTCTGGCATATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGCACCTACTATCAAGGCACCCCGTCTTCCTCCACTAGCTGTTGATCCATACACGAGATATGGGCCCAAAGCAGAGATAACCCACTTATTCAGGACTCCTGAAAGTAAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTCAGCTTCACCGGTTCAATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGGAAAGTCACCTCTTCTTATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGAAAGTTCAGTGTGTTTGTTCAGGAAGGGAATGTGCTCAATAATTATATTAAAAGATGGATTTAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGACGACAAGGGTGATTTCGTTGGCACTGCAGTTCGTTGAAGAGGAGACTGGCATAAAGTTCAAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGACAGTAGACTATAAGAGACCAACCTATGAAGAAGTTGAGAACCTACAAGCCTTACTTCCAAGGGAGTGCAATATCTACCAAATGCAAATCGGCGAAATGGTGAACTTTATGGATTCAAAATGTAGTTCAATCCATTTTCTTCACTAA 1176 0.4354 MAFRVSCSVSELGGGNCFLRLLLGFDVGLALVEGIVALLHCFRDWYNLEKSKQVKAFRCGEYGECIEKAKFWKLVHQNTQHQLLLKFILQQLLAVAPSWFIHLDFLGLVEKFYYLSGIYDIELTVGDAVMENSFLRPLGHLELDLPEAPTIKAPRLPPLAVDPYTRYGPKAEITHLFRTPESKVAVEGRVQFDLLQVSFTGSMEVGREIMHAAASSNLKQVSLELVGKSPLLIFDDADVDKAASLALLGIVYNKGEICVESSVCLFRKGMCSIIILKDGFRQGFLLEELFWNCLLECWMTTRVISLALQFVEEETGIKFKLEDMVDLTAFLDSSTGCRFFPSPTVDYKRPTYEEVENLQALLPRECNIYQMQIGEMVNFMDSKCSSIHFLH* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1550 391 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 196 226 IPR016162 GO:0016491
Ahy3g1550 391 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 99 187 - -
Ahy3g1550 391 SUPERFAMILY ALDH-like 197 266 IPR016161 GO:0016491
Ahy3g1550 391 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 268 IPR016163 GO:0016620
Ahy3g1550 391 Pfam Aldehyde dehydrogenase family 196 270 IPR015590 GO:0016491
Ahy3g1550 391 Pfam Oligosaccharyltransferase subunit Ribophorin II 71 183 IPR008814 GO:0006487|GO:0008250|GO:0016021
Ahy3g1550 391 PANTHER RIBOPHORIN II 99 187 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1550 Ahy-Chr3 27915653 27919071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1550 191 277 Aldehyde Dehydrogenase Gene Family AT3G24503 64.368 9.11e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1550 K12667 - ahf:112775503 779.245