Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1530 ATGGCAGCAACATTAATGGCAGCCACAGCTAGCTCTGGCACTGTCCTTAAATCAACCCCTTTCCTTGGTCAAACTAGGGGATCCAACGCTAACCCTCTTAGAGATGTTGTCTCTATGGGAACTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACACCTTCGTACTTGACTGGAGAGTTCCCAGGAGACTATGGTTGGGACACTGCTGGTTTGTCTGCTGATCCTGAAGCATTTGCCAGGAACAGGGCTCTTGAGGTTATCCATGGACGCTGGGCTATGCTGGGAGCACTAGGGTGCATCACCCCAGAAGTGCTAGAAAAGTGGGTCAGAGTGGACTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCACAAATTTTCTCCGAAGGCGGCCTCGACTACTTAGGCAACCCAAATCTAGTCCATGCACAGAGCATCCTGGCAGTTCTTGGATTCCAAGTTGTCCTCATGGGCCTCGTCGAGGGCTTCCGCATCAACGGCCTCCCCGGCGTGGGCCAGGGCAACGACCTCTATCCTGGGGGACAGTACTTTGACCCTCTTGGACTTGCCGACGACCCTGTCACTTTCGCTGAGCTCAAGGTGAAGGAGATCAAGAACGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTGCAAGCCATTGTCACTGGGAAAGGACCACTTGAGAACCTTTTGGATCACCTTGATAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGTGCCTGGTTCTTGA 810 0.5123 MAATLMAATASSGTVLKSTPFLGQTRGSNANPLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGQGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1530 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 7 269 - -
Ahy3g1530 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Ahy3g1530 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Ahy3g1530 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Ahy3g1530 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1530 Ahy-Chr3 27539996 27541291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1530 14 268 Chloroplast and Mitochondria Gene Families AT2G05070 68.182 6.05e-123 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1530 K08914 - vvi:100260599 532.332