Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1529 ATGAAGCTCTGTTATTTGAACGAGCCATCAGTTCTTCACAATATTAAGTTCAGACATTCTCAGGACATGATTTATACTAAAGCAGGTCCCGTTTTAATTGCAGTCAATCCCTTCAAAGATCTCCAGATTTTTGGAAATGATCGTATTTCAGCTTATAAGCAGAAATTTACCAATAGTCCTCATGTTTTTGCTGTGGCTGATGAGGCTTTTACGGAGATGATGAGAGATGAAGCAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCAAAGATTGCTATGCAGTACTTAGCTGCTGTTGGTGGTAGTAATAGGGGTACAGAAGAAAAAATTCTTCAAACAAATCATGTGCTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGAAAACTCTAGCAGATTTGGGAAGCTGATTGAAATTCATTTCAGCACAATGGGTAAAATCCATGGGGCTAAAGTTCAAACATTTTTGATAGAAAAGTCAAGAGTTGTTCAGCTGGCCAGTGGTGAGAGGTCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATTTGGCCTTAAAGAGAGACTTAATCTTAGAGCAGCCAGCTATTATAAATATCTTAATCAGAGTGAATGCTTGATGATTGATGGCATTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTCGATATTGTCCAAATTTGCAAAGAGGACCAAGAGCTGATCTTTAAGGTGCTGGCTGCTATACTATGGCTGGGAAATATATCATTCAAAGTTGCAGACAGTGAGAATGACATTGAGGTTCTGGATGATGAAGCTGTTACCAGTGCTGCTCGGCTGATGGGTTGCAGCTCCCAGGCATTGAAGGCAGCATTATCTACCAAGAAAATCCAGCCTGAGAAGGATACTAATGCAAAAAAATTGATATTGCAGCAGGCAATTCAAACGAGAGACGAAATTGCAAAATTTATGTATGAAAACTTGTTTAACTGGATTGTAGACCAAATCAACAAGTCACTTCAAGTGGGTAAAAGATGTACTGGGAAATCCATAAATATCTTGGATATTACTGGTTTTGAATCATTCCAGAAAAGTAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAAAGACTTCAACATCATCTCAATCGGCATCTGTTTAAGCAAGAGCAGGAGGACTACGAGTCAGATGGGATTGAGTGGACTAAAATATATTTTAAGGACAATCAAGAGTGCTTGGATCTCTTTGAGAGGAAACCTCACAGTCTACTCACCTTGTTGGATGAGGAATCAAATTTGCCTAAGGCTTCTGATCTAACGTTTGCAAACAAACTTAAGCAGCACTTGAGTACTAATCCTTACTTCAAAGGGGAGAGAGGCAGGGCTTTCAGTGTTCGTCATTATGAAGGGGAGGTTCTGTATGATACGAATGGCTTTCTAGAAAAGAACAGAGATTTTATGCCTTCCGATTCCGTACAATTCCTTGCTTCATGTAAATGTGAACTGCTGCCATTGTTCTCCAAAATGTTTGATCAGTCTCTGAAGTGTTCAAATTCCTTCAGCACAGGTGCCGTGGATTCACAGGAGCAGAGTGTTTGTAAAAAGTTTAAGGGTCAATTGTTCAATTTGATTGACCAATTGGAGTGCACCACACCTCACTTCATTCGATGCATAAGGCCAAATACTAAGCAGCTGCCTGACATTTATGATGAAGACCTTGTCCTACAACAGCTCAAGTGTAGTGGGATTCTTGAGGTTGTTAGAACTTCAAGGGCTGGATATCCAACTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTATGCTTTCTGAGGCCAACAAATATCAGGATCCATTGAGCACTTCAGTTGCCATTTTGCAACAATTTAATATCCCTTCTGAGATGTACCAATTCGGCTATACTAAGTTGTATCTTCGAGCTGGGCAGACTGGTTCACTGGAGCTCAAGAGAAAACAGGTTTTGCAAGGAATAGTTGTGGTTCAAAAATACTTCCGTGGTTATCAAGCAAGGAGTTATTTCCAGGAACTTAAGAAAGGAGTGGCAACATTACAATCATATGTTCGTGGAGAAATTACAAGAAGGAAATTTGGTGTTATGAAGCCTTCTATAACAATTTATTCTAAAAATCTTGAGGAGATCCAAGCAATCATACAACTGCAATCTGTAATTCGTGGGTGGCTGGCTCGTAAGGATGCAAGTACTCCAAACGGTTTTAAGAGTTATCCTGAAAATGCAAAACATAGACGGAAATCACTTGTTAAGATGCTGGAAGTGAAGGATATATCCAAAGAGCGGGTTCAGAACCTACCTTCACCATTAGCCCAACTACAAAGGCGAGTTGACAAGGCCGAAGAGGAAAATGCTAAATTAAGGGAACAGCTAAAACAATCTGAGAGAAAGTGGGCTGAATATGAGGCAAAGATGAAATCAATGGAGGAAGCATGGCAAAAACAGAGAGCATCCTTGCAAATGAGTCTCGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAGTGGCAATACTCAATCTACAAGAAATGAAGTCCTGTCTCCTCGGTACTATGGTTCTGAAGATGCTAGCGTGGGATCTCGAACAGCTGTGAACACTCCGATAAAGTTTTCTAGCAATTTCGCTGTCTCTGATGGAGGCAGAGAGGCTAACGGGATCAGAGAAAGAGGGACAAATGGTACTTTGAGCAGTCTGATGAAGGAATTTGACCAGCGAAGGCAGAACTTCGACGACGAAGTTAAAGCTCTGAATGAGGTTAAACCAGGGAACTCCACCACCACAAATTCCATTGAAGAATTTCGTAAACTTAAGCAGAGTTTTGAGGGATGGAAGAAACAATACAAGGTTAGGTTACGCGAGACAAAAGCAAAGCTTCATGAAGCAGATAAAAGTCGGAGGACATGGTGGGGGAAATTAAAAAATTGA 2973 0.4016 MKLCYLNEPSVLHNIKFRHSQDMIYTKAGPVLIAVNPFKDLQIFGNDRISAYKQKFTNSPHVFAVADEAFTEMMRDEANQSIIISGESGSGKTETAKIAMQYLAAVGGSNRGTEEKILQTNHVLEAFGNAKTSRNENSSRFGKLIEIHFSTMGKIHGAKVQTFLIEKSRVVQLASGERSYHIFYQLCAGSSFGLKERLNLRAASYYKYLNQSECLMIDGIDDAKKFHQLMKALDIVQICKEDQELIFKVLAAILWLGNISFKVADSENDIEVLDDEAVTSAARLMGCSSQALKAALSTKKIQPEKDTNAKKLILQQAIQTRDEIAKFMYENLFNWIVDQINKSLQVGKRCTGKSINILDITGFESFQKSSFEQFCINYANERLQHHLNRHLFKQEQEDYESDGIEWTKIYFKDNQECLDLFERKPHSLLTLLDEESNLPKASDLTFANKLKQHLSTNPYFKGERGRAFSVRHYEGEVLYDTNGFLEKNRDFMPSDSVQFLASCKCELLPLFSKMFDQSLKCSNSFSTGAVDSQEQSVCKKFKGQLFNLIDQLECTTPHFIRCIRPNTKQLPDIYDEDLVLQQLKCSGILEVVRTSRAGYPTRMTHQEFSTRYGFMLSEANKYQDPLSTSVAILQQFNIPSEMYQFGYTKLYLRAGQTGSLELKRKQVLQGIVVVQKYFRGYQARSYFQELKKGVATLQSYVRGEITRRKFGVMKPSITIYSKNLEEIQAIIQLQSVIRGWLARKDASTPNGFKSYPENAKHRRKSLVKMLEVKDISKERVQNLPSPLAQLQRRVDKAEEENAKLREQLKQSERKWAEYEAKMKSMEEAWQKQRASLQMSLVAARKSLASDSGNTQSTRNEVLSPRYYGSEDASVGSRTAVNTPIKFSSNFAVSDGGREANGIRERGTNGTLSSLMKEFDQRRQNFDDEVKALNEVKPGNSTTTNSIEEFRKLKQSFEGWKKQYKVRLRETKAKLHEADKSRRTWWGKLKN* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1529 990 SMART iq_5 666 688 IPR000048 GO:0005515
Ahy3g1529 990 SMART iq_5 689 711 IPR000048 GO:0005515
Ahy3g1529 990 SMART iq_5 725 747 IPR000048 GO:0005515
Ahy3g1529 990 Pfam Myosin head (motor domain) 2 653 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 Gene3D - 366 555 - -
Ahy3g1529 990 ProSiteProfiles IQ motif profile. 726 754 IPR000048 GO:0005515
Ahy3g1529 990 Coils Coil 787 828 - -
Ahy3g1529 990 Gene3D Myosin VI head, motor domain, U50 subdomain 235 343 - -
Ahy3g1529 990 PRINTS Myosin heavy chain signature 79 104 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 PRINTS Myosin heavy chain signature 25 44 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 PRINTS Myosin heavy chain signature 122 149 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 PRINTS Myosin heavy chain signature 407 435 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 PRINTS Myosin heavy chain signature 354 382 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 ProSiteProfiles Myosin motor domain profile. 1 665 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 PANTHER MYOSIN-2 ISOFORM X1 2 988 - -
Ahy3g1529 990 PANTHER MYOSIN 2 988 - -
Ahy3g1529 990 ProSiteProfiles IQ motif profile. 669 696 IPR000048 GO:0005515
Ahy3g1529 990 Coils Coil 915 935 - -
Ahy3g1529 990 Gene3D Kinesin motor domain 2 598 IPR036961 -
Ahy3g1529 990 ProSiteProfiles IQ motif profile. 690 718 IPR000048 GO:0005515
Ahy3g1529 990 CDD MYSc_Myo8 9 653 IPR036022 -
Ahy3g1529 990 Gene3D - 669 716 - -
Ahy3g1529 990 Coils Coil 960 980 - -
Ahy3g1529 990 Pfam IQ calmodulin-binding motif 671 688 IPR000048 GO:0005515
Ahy3g1529 990 Pfam IQ calmodulin-binding motif 728 745 IPR000048 GO:0005515
Ahy3g1529 990 SMART MYSc_2a 2 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy3g1529 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 716 IPR027417 -
Ahy3g1529 990 Gene3D - 599 666 - -
Ahy3g1529 990 Gene3D - 178 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1529 Ahy-Chr3 27529630 27539381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1529 1 987 Myosins gene family AT5G54280 59.684 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1529 K10357 - gmx:100819335 1368.21