Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1508 ATGTCCATAAACGAGGATGATGTGAAGAAGGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGACAATGCTAAAGACGACGATGTGGATTCACTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATCTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCCTGCCAGTTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATTATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCGCTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTCTCACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGTTGCCATATTATGGGGTATATTGCATTCCCGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAGACTATTTGATTGGCAAATCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCGATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCGGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGCTGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGGTCTTATATACGACAACAACGACCAGAGAGAATTTGATCGGAGATGGACAGCCATTTTGGATAAGCACAACCTTGTTGGTAGTACCTGGATGGAGAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAATGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCTGTGATGATTACCTCATTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAATGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTGGGAGACCCGGCCAAAGATCGCCGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGATATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCGTTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCTTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCATTCGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTGCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCATACGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCAAGGTCGTTCTCAATTAAGTCCGAACACCATTCAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCAAGAACGATGAATGCGTTAATGATGTCGTTGATGATAAATGTGACACGGACATGTGCAGATCGATGTCCGAGATCCGTTAA 2538 0.4381 MSINEDDVKKDSDNDLGDDFDYQPNAEDNAKDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDRVQVENLHNFGVKSCHIMGYIAFPKGGYRHAGFTRKDLYNHIDRYRRAKVKNGDANAAIDYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDQREFDRRWTAILDKHNLVGSTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNIMVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTDMPVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSAWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNPRDRSYGNASAKDSGFSPERFANSSRSFSIKSEHHSGPNTKPFKKGGTRKFTATGMRNRKGKDNTFVEVKESQQDKRHSFKNDECVNDVVDDKCDTDMCRSMSEIR* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1508 845 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 720 IPR031052 GO:0006355
Ahy3g1508 845 ProSiteProfiles Zinc finger CCHC-type profile. 715 730 IPR001878 GO:0003676|GO:0008270
Ahy3g1508 845 MobiDBLite consensus disorder prediction 1 42 - -
Ahy3g1508 845 Pfam MULE transposase domain 286 380 IPR018289 -
Ahy3g1508 845 MobiDBLite consensus disorder prediction 756 775 - -
Ahy3g1508 845 MobiDBLite consensus disorder prediction 739 795 - -
Ahy3g1508 845 MobiDBLite consensus disorder prediction 24 42 - -
Ahy3g1508 845 SUPERFAMILY Retrovirus zinc finger-like domains 701 733 IPR036875 GO:0003676|GO:0008270
Ahy3g1508 845 ProSiteProfiles Zinc finger SWIM-type profile. 563 599 IPR007527 GO:0008270
Ahy3g1508 845 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy3g1508 845 MobiDBLite consensus disorder prediction 1 17 - -
Ahy3g1508 845 PANTHER OS02G0262500 PROTEIN 60 720 - -
Ahy3g1508 845 SMART 26again6 574 601 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1508 Ahy-Chr3 27001254 27004180 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1508 MULE 3.70E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1508 - - ahf:112755379 1672.52