Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1488 ATGAAGATCAATCCTTCTTTCTGGACTATCATTGTTTACACATTAGTTATTGCCACTCCCTTCTTTCATCATGAATCCAATGCAATGAACACTTCTATCATTACCCCAAACCTATGCCTCGGTGACGGCAAGACCATAGTTTCCAAAGATAAAGGAACCTTTGAACTTGGCTTCTTCACAAAATCCAACAAACGCTACCTTGGAATTTGGTACGCCAACATCACAATCCAGACCATTGTGTGGGTGGCGAACGGTGCCAACCCCATCAACGATTATTCCCCTGTTACCCCTCCCATTTTAGAACTTAAAAGCAATGGAAGCTTGGTTCTTACTCACAAGAACGTTCTTGTATGGCAAACAATCAGCAGTTCCCCGGCAACCGCAGTGCGGAATCCGGTGGCGGAGCTTCTTGATTCCGGCAATCTTGTGATAAGAGAGGACAATGATACAAACCCACAACGCTATTTGTGGCAGAGCTTTGACTACCCTTCGAATACAATGTTGGCAGGGATGAAACTGGGATGGGACATTAGAAGAAATTTCAACAGGAAGATCACAGCTTGGAAGACTGATGATAATCCAGCACCAGGTGACTTTTCTTGGAGTGTTATGCGGTACAACTACCCTGAAGTGTATATGACGAAGAGAAGAAGAAAGATGTACAGAATTGGACCCTGGAACGGCTTGCGTTTCAGTGGCATGCCAGAACTGAGATCCAATCCAATATTTAATTTCAACTTCGTCTCCACTGCTGAAGAAGTTTACTACACATGGACCCTCAAGGACCCTTCTCTAACAACCATCGCAGTCCTTAACCAGAGCGCGGGCGGCCGCCCTCGCTACGTTTGGTCGGAGGCCGATGAATCGTGGAGGACTTATTCAACTTTGCCAGGGGACTATTGTGATACCTATGGACTGTGTGGTCCTAATGGATATTGTAGCATAACTGCATCACCAGTGTGTGAGTGTTTGAAAGGGTTTAAGCCCAAGTTTCCCAAAAAGTGGAACTCAATGGATTGGTCCCAAGGATGTGAAAGAAACCATCCAATAAGGTGCAATAGTAATGGTACCAATGAGGATGGTGATGGGTTTGTGCTTTTGCAGGGATTGAAAGTGCCAGATACTGAATATACTTTGGTGTATAAGGATATTGATTTGAATAAATGTAGAGCCATGTGCTTGGAAAATTGTTCATGCATGGCTTATACAAACTCAGATATAAGAGGAGGTGGTCAAGGCTGTGTCATGTGGTTTCATGATTTAATTGATATCAAACTGTTTCCTGATGGTGGACAGGAACTATACGTCCGACTGCGTGCTTCTGACTTGGAAAAGTCATCGAAGATAGAAGATAATTATGAAAGTTATGTAGATGATTTGGATCTTCCATTGCTTAATTATTCAACAATTATGGTTGCTAGTAATAACTTCTCAGTGAAGAATAAGATTGGAGAAGGTGGTTTTGGACCAGTATATTTGGGAAAATTAGCAAATGAACAAGAAGTTGCTATAAAGAGACTATCAAAGAGTTCAATACAAGGATTTTCTGAGTTCATAAATGAAGTTAAACTAATTGCAAAACTTCAACATCGAAATCTTGTAAAACTTATTGGTTGTTGCATTCAAGGACAAGAGAAGATGCTAGTTTATGAATACATGACCAACGGTAGCTTAGATTACTTCATTTTCGATCATAGCAAAGGAAAATTGCTAAACTGGCAAAAGCGCAATCACATAATAGGTGGAATCGCTAGAGGCCTTATGTATCTTCATCAAGATTCTCGACTGAGAATTGTACATAGAGATCTTAAAGCGAGTAATATTTTACTTGATCATAATTTAAATTCAAAAATATCAGATTTTGGAATGGCTAGACTTTTTAGAGGAGAGCAAAACGAAGAAAGTACAAATAAAATTGTTGGGACTTTTGGATACATGGCACCAGAGTATGTCCTTGATGGATTATTTTCGGTAAAATCTGATGTTTACAGTTTTGGCGTTTTATTGCTAGAGATTATAAGTGGGAAAAAGAATAGAAGATCTCATGCAAAGCAATCATCCCTTAACCTCATTGATCATACATGGGCACTGTGGAAAATGGGCAATGCTTTCCAAATAATTGACCCAAATATTGAAGACTCATGCATTGAATCTGAAGTATTGCGTTTCATCCATATTGCTCTATTGTGCGTACAACATTGTCCAGAAGATAGACCTAATATGACCTCAGTAGTTCTAATGTTAAGTAGTGAGATGGAATTGGATCAACCTAAAGAGCCTGGTTTTTTCACTAGGAGGGAAAATGTTGAAGCAAATTCATGCACAAGTTACCCAAGTTCAAATAATGAAATTAGCATAACCTTATTAACTGGCAGGTGA 2379 0.3976 MKINPSFWTIIVYTLVIATPFFHHESNAMNTSIITPNLCLGDGKTIVSKDKGTFELGFFTKSNKRYLGIWYANITIQTIVWVANGANPINDYSPVTPPILELKSNGSLVLTHKNVLVWQTISSSPATAVRNPVAELLDSGNLVIREDNDTNPQRYLWQSFDYPSNTMLAGMKLGWDIRRNFNRKITAWKTDDNPAPGDFSWSVMRYNYPEVYMTKRRRKMYRIGPWNGLRFSGMPELRSNPIFNFNFVSTAEEVYYTWTLKDPSLTTIAVLNQSAGGRPRYVWSEADESWRTYSTLPGDYCDTYGLCGPNGYCSITASPVCECLKGFKPKFPKKWNSMDWSQGCERNHPIRCNSNGTNEDGDGFVLLQGLKVPDTEYTLVYKDIDLNKCRAMCLENCSCMAYTNSDIRGGGQGCVMWFHDLIDIKLFPDGGQELYVRLRASDLEKSSKIEDNYESYVDDLDLPLLNYSTIMVASNNFSVKNKIGEGGFGPVYLGKLANEQEVAIKRLSKSSIQGFSEFINEVKLIAKLQHRNLVKLIGCCIQGQEKMLVYEYMTNGSLDYFIFDHSKGKLLNWQKRNHIIGGIARGLMYLHQDSRLRIVHRDLKASNILLDHNLNSKISDFGMARLFRGEQNEESTNKIVGTFGYMAPEYVLDGLFSVKSDVYSFGVLLLEIISGKKNRRSHAKQSSLNLIDHTWALWKMGNAFQIIDPNIEDSCIESEVLRFIHIALLCVQHCPEDRPNMTSVVLMLSSEMELDQPKEPGFFTRRENVEANSCTSYPSSNNEISITLLTGR* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1488 792 CDD PAN_AP_plant 348 438 - -
Ahy3g1488 792 ProSiteProfiles PAN/Apple domain profile. 352 439 IPR003609 -
Ahy3g1488 792 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 40 448 - -
Ahy3g1488 792 Pfam Domain of unknown function (DUF3403) 749 792 IPR021820 GO:0004674
Ahy3g1488 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Ahy3g1488 792 SUPERFAMILY Protein kinase-like (PK-like) 463 761 IPR011009 -
Ahy3g1488 792 Gene3D Transferase(Phosphotransferase) domain 1 553 763 - -
Ahy3g1488 792 PIRSF SRK 2 458 IPR024171 GO:0004674
Ahy3g1488 792 PIRSF SRK 444 792 IPR024171 GO:0004674
Ahy3g1488 792 Pfam PAN-like domain 358 424 IPR003609 -
Ahy3g1488 792 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 451 789 - -
Ahy3g1488 792 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544
Ahy3g1488 792 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 451 789 - -
Ahy3g1488 792 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 448 - -
Ahy3g1488 792 Gene3D - 27 160 IPR036426 -
Ahy3g1488 792 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Ahy3g1488 792 CDD B_lectin 40 163 IPR001480 -
Ahy3g1488 792 Gene3D Phosphorylase Kinase; domain 1 439 552 - -
Ahy3g1488 792 SMART ntp_6 359 438 IPR003609 -
Ahy3g1488 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 194 IPR036426 -
Ahy3g1488 792 Pfam Protein tyrosine and serine/threonine kinase 479 745 IPR001245 GO:0004672|GO:0006468
Ahy3g1488 792 SMART serkin_6 477 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1488 792 ProSiteProfiles Protein kinase domain profile. 477 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy3g1488 792 ProSiteProfiles Bulb-type lectin domain profile. 31 157 IPR001480 -
Ahy3g1488 792 CDD STKc_IRAK 483 748 - -
Ahy3g1488 792 Pfam D-mannose binding lectin 78 189 IPR001480 -
Ahy3g1488 792 SMART blect_4 37 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1488 Ahy-Chr3 26314871 26323664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1488 465 762 Receptor kinase-like Gene Family AT4G23230 59.197 1.87e-118 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy3g1488 PK_Tyr_Ser-Thr 4.30E-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1488 - - ahf:112733195 1597.02