Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1480 ATGGCAGAAGGTGCTGAAGAATTTGTACAACAGACGGATTCACCCAATGAAATTGTTGCCAGTCAATCAATTTCTGAGAATATAGAAAACTACACTAACTCTGATGAGGTCATAAACCAAGCCATTGGTGACGAGGAGGTAGATCCCGAGGAGGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTAGGACTGGATTTGTCGTCAAAATAAGAACCACCGGCTGGGAGACCATAAACGATCAGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAGGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGTATCCCACTCACACCCGCTTAATCCAAAGCTATCTGGAATGTTCTCAGCAAACCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATGACCAAGCTAGCATTAGACCGAGTAAGACGTACCAGGCACTAGCCAATGCAGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGGATGTTAGAAATTACATTAGTCATCACTTACGCATTTCCGGGGATGAGACGGATCCAAAAGAAGCTGCATGGGAATATTTTGGTGATGTCGTGACGTTTGACACTACTTACAAGACTAATAGGTGTCAACCACCATGGGATGTCTACGCTTCTTGGATGCGCATTATTGCGGAATGA 792 0.4571 MAEGAEEFVQQTDSPNEIVASQSISENIENYTNSDEVINQAIGDEEVDPEEGMCFGTLEDARAYYYRYAARTGFVVKIRTTGWETINDQRVVVNQALHCNRDGYRTSRVKAPQRGKTVASTNCKARCYLALDKMTGQWRISRVEVSHSHPLNPKLSGMFSANRQLSMHVKDLIQQNDQASIRPSKTYQALANAVGGPANLTFTEKDVRNYISHHLRISGDETDPKEAAWEYFGDVVTFDTTYKTNRCQPPWDVYASWMRIIAE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1480 263 PANTHER OS03G0843700 PROTEIN 20 179 - -
Ahy3g1480 263 Pfam FAR1 DNA-binding domain 64 153 IPR004330 -
Ahy3g1480 263 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 179 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1480 Ahy-Chr3 25912157 25914045 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy3g1480 FAR1 5.90E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1480 - - ahf:112775207 536.569