Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1478 ATGGATTCATCACATCTTCTCGGTTACAGTGTGACTAATTCTAGCTTACTCAGCAAATCATCTTTTCCAACTACACCTCCGTTATCCCACCTGCTACTTGGACCTTTGAATGAAGCAGTAAACTCACCTAATTTGTCTCTTTCTACTCACTTCAACTCTGATACTGATTCTGCATTGAATGATAGTCAGCAGTTAGTTGAAGTTACGCGTGCAGAGAAACGTCACAAATCAATGGAGGAAGCGTCGCTACAGAGCATTCCATCGAGCACTTTGAAACAATTGCTCATTTTATGCGCCAAAGCAATGTCTGAAAACAAGATGAAAGATTTTGATCAATTGATAGACAAGGCTAGAAGTGCTGTGTCTATCAGCGGGGAGCCAATTCAGCGGCTCGGTGCTTATTTATTGGAAGGGCTTGTTGCAAGGAAGGAGAAATCGGGTAACAACATCTATCATGCTCTTAGGTGCAAGCAGCCTGCAGGTACAGAGTTACTATCATACATGCAGATGTTATATGAAATTTGTCCATACTTCAAGTTTGGTTACATGGCTGCCAATGGAGCTATTGCTGAAGCATGCCGAAATGAGGATCGAATTCACATCATAGATTTTCAGATTGCACAGGGAACTCAATGGACGACTCTCCTTCAAGCTCTTGCAGCAAGGCCTAGTGGGGCTCCACATGTGCGGATCACCGGGATTGATGATCCTGTTTCTAAATATGCTCGAGGAGAGGAATTGGAGGCAGTTGGTGAAAGTTTGTCGAAAATATCTAAGAAATTTGACATTGAGGTTGAGTTTCATGGAATTCCTGTCTTTGCCCCAGATGTAACCAGGGATATGCTTGATGTCCGGCCTGGAGAGGCCTTGGCCGTTAACTTTCCTCTTCAACTCCATCATACGGCCGATGAGAGTGTCGATGTGACTAATCCAAGGGACGGACTTCTGAGATTGGTTAAGTCTCTTTCTCCTAAGGTAACCACATTGGTGGAGCAGGAATCGAACACAAACACGACGCATTTCTTCAACAGGTTCATAGAAACACTTGATTACTACTTGGCCATGTTCGAGTCCATCGATGTTGCCCTCCCAAGAACGAGCAAGGAGCGGATCAACGTGGAACAACATTGTTTAGCTCGAGATATTGTGAACATTGTTTCTTGTGAAGGGAAGGAAAGGGTGGAGCGGCATGAACTGTTTGGTAAGTGGAGGTCCAGGTTCACAATGGCAGGTTTTGTTCAATATCCTTTGAGCTCTTATGTGAATTCCATTATAAGAAACCTCTTGAATCGCTATTCGGAGAATTATAGTCTGGTGGAGAAGGATGGAGCCATGCTGTTGGCATGGAAGAACAGAAATTTGATATCAGCTTCAGCCTGGTATTAA 1386 0.4387 MDSSHLLGYSVTNSSLLSKSSFPTTPPLSHLLLGPLNEAVNSPNLSLSTHFNSDTDSALNDSQQLVEVTRAEKRHKSMEEASLQSIPSSTLKQLLILCAKAMSENKMKDFDQLIDKARSAVSISGEPIQRLGAYLLEGLVARKEKSGNNIYHALRCKQPAGTELLSYMQMLYEICPYFKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWTTLLQALAARPSGAPHVRITGIDDPVSKYARGEELEAVGESLSKISKKFDIEVEFHGIPVFAPDVTRDMLDVRPGEALAVNFPLQLHHTADESVDVTNPRDGLLRLVKSLSPKVTTLVEQESNTNTTHFFNRFIETLDYYLAMFESIDVALPRTSKERINVEQHCLARDIVNIVSCEGKERVERHELFGKWRSRFTMAGFVQYPLSSYVNSIIRNLLNRYSENYSLVEKDGAMLLAWKNRNLISASAWY* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1478 461 ProSiteProfiles GRAS family profile. 82 461 IPR005202 -
Ahy3g1478 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 460 IPR005202 -
Ahy3g1478 461 Pfam GRAS domain family 91 460 IPR005202 -
Ahy3g1478 461 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 57 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1478 Ahy-Chr3 25810464 25813866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1478 81 460 GRAS Transcription Factor Family AT5G48150 63.255 2.51e-176 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy3g1478 GRAS 1.30E-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1478 - - adu:107478273 900.582